Edwardsiella ictaluri S15-163 |
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Putative Edwardsiella ictaluri S15-163 RM systems
Ref: Rose,D. et al. unpublished
REBASE ref # 36534
| Sequence length: | GenBank #: | |
| Chromosome: | 3,828,910 bp | CP092065 |
| plasmid pEI-S15163-1: | 117,441 bp | CP092067 |
REBASE acronym: Eic163
Org_num: 66392
All begin MAY82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3280 | 413 aa hypothetical protein | |||
| 3285 | R | EicORF1012P (100% identity) | Eic163ORF3300P | |
| 3290 | S | S.EicORF1012P (30% identity) | S2.Eic163ORF3300P | |
| 3295 | S | S.EicORF1012P (64% identity) | S1.Eic163ORF3300P | |
| 3300 | M | M.EicORF1012P (100% identity) | M.Eic163ORF3300P | |
| 3305 | oligogalacturonate-specific porin KdgM family | |||
| 5580 | G/U mismatch-specific DNA glycosylase | |||
| 5590 | R | EicORF518P (100% identity) | GGANNNNNNNVTATC | Eic163ORF5600P |
| 5595 | S | S.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | S.Eic163ORF5600P |
| 5600 | M | M.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | M.Eic163ORF5600P |
| 5605 | 135 aa hypothetical protein | |||
| 7855 | IS256-like element ISEic2 family transposase | |||
| 7860 | S | S.EicORF44P (100% identity) | S.Eic163ORF7865P | |
| 7865 | M | M.EicORF44P (100% identity) | M.Eic163ORF7865P | |
| 7870 | R | Eic773ORF155P (100% identity) | Eic163ORF7865P | |
| 7875 | 194 aa hypothetical protein | |||
| 10335 | transcription factor | |||
| 10340 | M | M.EicORF3444P (100% identity) | RAACNNNNNGTC | M.Eic163ORF10340P |
| 10345 | S | S.Eic773ORF15825P (100% identity) | RAACNNNNNGTC | S.Eic163ORF10340P |
| 10350 | DUF4433 domain-containing protein | |||
| 10355 | macro domain-containing protein | |||
| 10360 | R | EicORF3444P (100% identity) | RAACNNNNNGTC | Eic163ORF10340P |
| 10365 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1085 | transposase | |||
| 1090 | V | V.EicYCHORF6960P (100% identity) | V.Eic163ORF1095P | |
| 1095 | M | M.EicYCHORF6960P (100% identity) | CCWGG | M.Eic163ORF1095P |
| 1100 | R | EicYCHORF6960P (100% identity) | CCWGG | Eic163ORF1095P |
| 1105 | 215 aa hypothetical protein | |||
| 9475 | SPOR domain-containing protein | |||
| 9480 | M | M.EicYCHDamP (100% identity) | GATC | M.Eic163DamP |
| 9485 | ribulose-phosphate 3-epimerase | |||
| 11745 | AlpA family transcriptional regulator | |||
| 11750 | M | M.EicORF3149P (92% identity) | M.Eic163ORF11750P | |
| 11755 | 123 aa hypothetical protein | |||
| 11825 | phage tail sheath protein | |||
| 11830 | M | M.EicORF3136P (100% identity) | M.Eic163ORF11830P | |
| 11835 | 57 aa hypothetical protein | |||
| plasmid pEI-S15163-1 | ||||
| 18680 | 141 aa hypothetical protein | |||
| 18685 | M | M.Eta80813ORF1107P (100% identity) | CCNGG | M.Eic163ORF18685P |
| 18690 | 100 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3265 | 125 aa hypothetical protein | |||
| 3270 | R | Eic773McrCP (100% identity) | Eic163McrCP | |
| 3275 | R | EicMcrBP (58% identity) | Eic163McrBBP | |
| 3280 | R | Eic773McrBP (49% identity) | Eic163McrBAP | |
| 3285 | type I restriction endonuclease subunit R | |||