Escherichia coli E47 |
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Putative Escherichia coli E47 RM systems
Ref: Zhu,Q. et al. unpublished
REBASE ref # 36398
Complete sequence: 5,255,987 bp
GenBank #: CP121151
REBASE acronym: EcoE47
Org_num: 66414
All begin P6H31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16115 | GTPase family protein | |||
| 16120 | M | M.SflN97ORF14060P (100% identity) | M.EcoE47ORF16120P | |
| 16125 | S | S.SflN97ORF14060P (100% identity) | S.EcoE47ORF16120P | |
| 16130 | R | SflN97ORF14060P (100% identity) | EcoE47ORF16120P | |
| 16135 | IS1-like element IS1B family transposase | |||
| 22485 | restriction endonuclease | |||
| 22490 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoE47ORF22490P |
| 22495 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoE47ORF22490P |
| 22500 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoE47ORF22490P |
| 22505 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1680 | cell division protein DamX | |||
| 1685 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE47DamP |
| 1690 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoE47ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 5635 | replication endonuclease | |||
| 5640 | M | M.Sen24760ORF10410P (100% identity) | GATC | M.EcoE47ORF5640P |
| 5645 | TraR/DksA family transcriptional regulator | |||
| 6435 | DUF1382 family protein | |||
| 6440 | M | M.Eco1814ORF19690P (99% identity) | M.EcoE47ORF6440P | |
| 6445 | PerC family transcriptional regulator | |||
| 7165 | thermonuclease family protein | |||
| 7170 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoE47ORF7170P |
| 7175 | 55 aa hypothetical protein | |||
| 7785 | 284 aa hypothetical protein | |||
| 7790 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoE47ORF7790P |
| 7795 | DNA-binding protein | |||
| 7900 | 202 aa hypothetical protein | |||
| 7905 | M | M.YpsF1ORFBP (100% identity) | M.EcoE47ORF7905P | |
| 7910 | 48 aa hypothetical protein | |||
| 11215 | HD domain-containing protein | |||
| 11220 | M | M.SflN107DcmP (100% identity) | CCWGG | M.EcoE47DcmP |
| 11225 | V | V.SflN107DcmP (100% identity) | V.EcoE47DcmP | |
| 11230 | drug/metabolite exporter YedA | |||
| 17640 | replication endonuclease | |||
| 17645 | M | M.SflLIN8ORF15450P (100% identity) | GATC | M.EcoE47ORF17645P |
| 17650 | TraR/DksA family transcriptional regulator | |||
| 19400 | NinE family protein | |||
| 19405 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoE47ORF19405P |
| 19410 | recombination protein NinB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16300 | IS5 family transposase | |||
| 16305 | R | SflN97McrCP (100% identity) | EcoE47McrCP | |
| 16310 | R | SflN97McrBP (100% identity) | EcoE47McrBP | |
| 16315 | zinc ribbon protein | |||
| 22480 | BrnT family toxin | |||
| 22485 | R | Ecou021MrrP (100% identity) | EcoE47MrrP | |
| 22490 | class I SAM-dependent DNA methyltransferase | |||