Lacticaseibacillus paracasei VHProbi OF10 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lacticaseibacillus paracasei VHProbi OF10 RM systems
Ref: Cui,H. unpublished
REBASE ref # 30852
Complete sequence: 3,084,431 bp
GenBank #: CP092498
REBASE acronym: LpaOF10
Org_num: 66669
All begin MKL87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5330 | 188 aa hypothetical protein | |||
| 5335 | R | LpaXI3ORFBP (100% identity) | LpaOF10ORF5340P | |
| 5340 | M | M.LpaXI3ORFBP (100% identity) | M.LpaOF10ORF5340P | |
| 5345 | S | S1.LpaNJORF11655P (100% identity) | S1.LpaOF10ORF5340P | |
| 5350 | site-specific integrase | |||
| 5355 | S | S1.LpaST2ORF3180P (100% identity) | S2.LpaOF10ORF5340P | |
| 5360 | DUF262 domain-containing HNH endonuclease family | |||
| 5955 | glutamine-hydrolyzing GMP synthase | |||
| 5960 | M | M.LpaNJORF12345P (100% identity) | M.LpaOF10ORF5960P | |
| 5965 | S | S.LpaNJORF12345P (100% identity) | S.LpaOF10ORF5960P | |
| 5970 | R | LpaNJORF12345P (100% identity) | LpaOF10ORF5960P | |
| 5975 | nucleotidyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3010 | 73 aa hypothetical protein | |||
| 3015 | M | M.LpaNJORF9120P (100% identity) | M.LpaOF10ORF3015P | |
| 3020 | 108 aa hypothetical protein | |||
| 6050 | 115 aa hypothetical protein | |||
| 6055 | M | M.LpaXI3ORFCP (98% identity) | GTCGAC | M.LpaOF10ORF6055P |
| 6060 | helix-turn-helix domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5355 | restriction endonuclease subunit S | |||
| 5360 | R | LpaXI3GmrSDP (100% identity) | LpaOF10GmrSDP | |
| 5365 | 268 aa hypothetical protein | |||