Escherichia coli B1172 |
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Putative Escherichia coli B1172 RM systems
Ref: Fedrova,P. et al. unpublished
REBASE ref # 36455
| Sequence length: | GenBank #: | |
| Chromosome: | 5,147,947 bp | CP120549 |
| plasmid pB1172_153456: | 153,456 bp | CP120550 |
| plasmid pB1172_77638: | 77,638 bp | CP120551 |
REBASE acronym: Eco1172
Org_num: 66069
All begin P5710_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20645 | restriction endonuclease | |||
| 20650 | M | M.EcosA4II (100% identity) | GATANNNNNNTCC | M.Eco1172ORF20650P |
| 20655 | S | S.Eco0147ORF21455P (100% identity) | GATANNNNNNTCC | S.Eco1172ORF20650P |
| 20660 | R | EcosA4IIP (100% identity) | GATANNNNNNTCC | Eco1172ORF20650P |
| 20665 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1172DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1172ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 7485 | flagella biosynthesis regulator Flk | |||
| 7490 | M | M.EcoSO178ORF2370P (100% identity) | M.Eco1172ORF7490P | |
| 7495 | Com family DNA-binding transcriptional | |||
| 9995 | phosphohydrolase | |||
| 10000 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco1172DcmP |
| 10005 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco1172DcmP |
| 10010 | drug/metabolite exporter YedA | |||
| 13630 | 39 aa hypothetical protein | |||
| 13650 | M | M.EcoMS211ORF11760P (100% identity) | A | M.Eco1172ORF13650P |
| 13655 | TrmB family transcriptional regulator | |||
| 24390 | Com family DNA-binding transcriptional | |||
| 24395 | M | M.EcoSO178ORF2370P (100% identity) | M.Eco1172ORF24395P | |
| 24400 | DKNYY family protein | |||
| plasmid pB1172_153456 | ||||
| 25550 | 73 aa hypothetical protein | |||
| 25555 | M | M.SflN92ORF24820P (100% identity) | M.Eco1172ORF25555P | |
| 25560 | 101 aa hypothetical protein | |||
| plasmid pB1172_77638 | ||||
| 25835 | 103 aa hypothetical protein | |||
| 25840 | M | M.Sfl7ORF23565P (100% identity) | M.Eco1172ORF25840P | |
| 25845 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20640 | BrnT family toxin | |||
| 20645 | R | EcosA4MrrP (100% identity) | Eco1172MrrP | |
| 20650 | class I SAM-dependent DNA methyltransferase | |||