Escherichia coli LBV045/18_pyometra |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli LBV045/18_pyometra RM systems
Ref: Lopes,C.E. and Siqueira,F.M. unpublished
REBASE ref # 36456
Complete sequence: 5,199,489 bp
GenBank #: CP113981
REBASE acronym: Eco4518
Org_num: 66072
All begin OH692_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18630 | endoribonuclease SymE | |||
| 18635 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco4518ORF18645P |
| 18640 | S | S.Ecost88ORF20845P (99% identity) | GGYANNNNNGTNG | S.Eco4518ORF18645P |
| 18645 | M | M.EcoS165ORF17585P (100% identity) | GGYANNNNNGTNG | M.Eco4518ORF18645P |
| 18650 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4090 | drug/metabolite exporter YedA | |||
| 4095 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco4518DcmP |
| 4100 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco4518DcmP |
| 4105 | phosphohydrolase | |||
| 11195 | DNA-binding transcriptional regulator Fis | |||
| 11200 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.Eco4518ORF11200P |
| 11205 | DUF2556 family protein | |||
| 11795 | ribulose-phosphate 3-epimerase | |||
| 11800 | M | M.EcoEC01DamP (100% identity) | GATC | M.Eco4518DamP |
| 11805 | cell division protein DamX | |||
| 15655 | PerC family transcriptional regulator | |||
| 15660 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco4518ORF15660P |
| 15665 | LexA family transcriptional regulator | |||
| 17055 | 100 aa hypothetical protein | |||
| 17060 | R | EcoA30ORF21700P (74% identity) | Eco4518ORF17060P | |
| 17065 | IS481 family transposase | |||
| 18090 | 105 aa hypothetical protein | |||
| 18095 | R | Eco146ORF21920P (100% identity) | Eco4518ORF18100P | |
| 18100 | M | M.EcoEC01ORFHP (98% identity) | M.Eco4518ORF18100P | |
| 18105 | conjugal transfer protein TraG N-terminal | |||
| 21705 | TrmB family transcriptional regulator | |||
| 21710 | M | M.EcosE1ORFAP (100% identity) | M.Eco4518ORF21710P | |
| 21715 | 64 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17035 | 344 aa hypothetical protein | |||
| 17040 | M | M.EcoTE113ORF4602P (99% identity) | GWCCC | M.Eco4518ORF17040P |
| 17045 | 42 aa hypothetical protein | |||
| 17050 | R | EcoTE113ORF4602P (96% identity) | GWCCC | Eco4518ORF17040P |
| 17055 | 100 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18645 | class I SAM-dependent DNA methyltransferase | |||
| 18650 | R | Ecost88MrrP (100% identity) | Eco4518MrrP | |
| 18655 | 34 aa hypothetical protein | |||