Escherichia coli E15 |
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Putative Escherichia coli E15 RM systems
Ref: zhu,Q. et al. unpublished
REBASE ref # 36398
| Sequence length: | GenBank #: | |
| Chromosome: | 4,978,495 bp | CP119746 |
| plasmid pE15-1: | 226,260 bp | CP119747 |
REBASE acronym: EcoE15
Org_num: 65777
All begin P1J19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 345 | helix-turn-helix domain-containing protein | |||
| 350 | R | Vsp1111ORF14985P (100% identity) | EcoE15ORF355P | |
| 355 | M | M.VvuYORF266P (99% identity) | M.EcoE15ORF355P | |
| 360 | S | S.Vfl942ORF10P (100% identity) | S.EcoE15ORF355P | |
| 365 | 265 aa hypothetical protein | |||
| 3975 | extracellular solute-binding protein | |||
| 3980 | M | M.SflN101ORF19075P (94% identity) | GAACNNNNNTGC | M.EcoE15ORF3980P |
| 3985 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.EcoE15ORF3980P |
| 3990 | transposase domain-containing protein | |||
| 20465 | 322 aa hypothetical protein | |||
| 20470 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoE15ORF20475P |
| 20475 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoE15ORF20475P |
| 20480 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoE15ORF20475P |
| 20485 | endoribonuclease SymE | |||
| 20695 | 128 aa hypothetical protein | |||
| 20700 | M | M.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | M.EcoE15ORF20700P |
| 20705 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.EcoE15ORF20700P |
| 20710 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1770 | cell division protein DamX | |||
| 1775 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE15DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 2300 | DUF2556 family protein | |||
| 2305 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoE15ORF2305P |
| 2310 | DNA-binding transcriptional regulator Fis | |||
| 5965 | PerC family transcriptional regulator | |||
| 5970 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoE15ORF5970P |
| 5975 | LexA family transcriptional regulator | |||
| 9950 | phosphohydrolase | |||
| 9955 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoE15DcmP |
| 9960 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoE15DcmP |
| 9965 | drug/metabolite exporter YedA | |||
| 20675 | HNH endonuclease | |||
| 20680 | R | SflN101ORF11875P (100% identity) | EcoE15ORF20680P | |
| 20685 | AAA family ATPase | |||
| plasmid pE15-1 | ||||
| 24200 | 55 aa hypothetical protein | |||
| 24205 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoE15ORF24205P |
| 24210 | thermonuclease family protein | |||
| 24610 | 48 aa hypothetical protein | |||
| 24615 | M | M.YpsF1ORFBP (100% identity) | M.EcoE15ORF24615P | |
| 24620 | 202 aa hypothetical protein | |||
| 24725 | DNA-binding protein | |||
| 24730 | M | M.YpsF1ORFDP (95% identity) | M.EcoE15ORF24730P | |
| 24735 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20485 | endoribonuclease SymE | |||
| 20490 | R | Ecos673GmrDP (100% identity) | EcoE15GmrDP | |
| 20495 | R | SflN101GmrSP (100% identity) | EcoE15GmrSP | |
| 20500 | cytoplasmic protein | |||
| 20680 | HNH endonuclease | |||
| 20685 | R | SflN101McrBP (100% identity) | EcoE15McrBP | |
| 20690 | R | SflN101McrCP (100% identity) | EcoE15McrCP | |
| 20695 | 128 aa hypothetical protein | |||