Lacticaseibacillus rhamnosus VSI33 |
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Putative Lacticaseibacillus rhamnosus VSI33 RM systems
Ref: Whidbey,C. unpublished
REBASE ref # 36309
Complete sequence: 2,991,185 bp
GenBank #: CP118035
REBASE acronym: LrhVSI33
Org_num: 65471
All begin PUW67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10000 | 268 aa hypothetical protein | |||
| 10005 | S | S2.LrhY39IIIP (100% identity) | S2.LrhVSI33ORF10020P | |
| 10010 | site-specific integrase | |||
| 10015 | S | S1.LrhsA5ORFBP (100% identity) | GGHANNNNNNCGT | S1.LrhVSI33ORF10020P |
| 10020 | M | M.LrhsA5ORFBP (100% identity) | M.LrhVSI33ORF10020P | |
| 10025 | R | LrhsA5ORFBP (100% identity) | LrhVSI33ORF10020P | |
| 10030 | DUF998 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6050 | APC family permease | |||
| 6055 | M | M.LrhsA5ORFDP (100% identity) | M.LrhVSI33ORF6055P | |
| 6060 | DUF1998 domain-containing protein | |||
| 9405 | DEAD/DEAH box helicase | |||
| 9410 | RM | LrhsA5ORFCP (100% identity) | CAGRAG | LrhVSI33ORF9410P |
| 9415 | glutamine-hydrolyzing GMP synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9295 | helix-turn-helix transcriptional regulator | |||
| 9300 | R | LrhsA5MrrP (100% identity) | LrhVSI33MrrP | |
| 9305 | plasmid pRiA4b ORF-3 family protein | |||