Lactobacillus gasseri VSI47 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus gasseri VSI47 RM systems
Ref: Whidbey,C. unpublished
REBASE ref # 36309
| Sequence length: | GenBank #: | |
| Chromosome: | 1,903,801 bp | CP118032 |
| plasmid pLgVSI47_1: | 84,857 bp | CP118033 |
REBASE acronym: LgaVSI47
Org_num: 65482
All begin PUW43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4550 | 296 aa hypothetical protein | |||
| 4555 | M | M.LgrVSI07ORF3855P (100% identity) | M.LgaVSI47ORF4555P | |
| 4560 | S | S1.LgrVSI07ORF3855P (100% identity) | S1.LgaVSI47ORF4555P | |
| 4565 | tyrosine-type recombinase/integrase | |||
| 4570 | S | S2.LgrVSI07ORF3855P (99% identity) | S2.LgaVSI47ORF4555P | |
| 4575 | R | LgrVSI07ORF3855P (99% identity) | LgaVSI47ORF4555P | |
| 4580 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7315 | 52 aa hypothetical protein | |||
| 7320 | M | M.Lpa18ORF7775P (97% identity) | M.LgaVSI47ORF7320P | |
| 7325 | R | Lpa18ORF7775P (97% identity) | LgaVSI47ORF7320P | |
| 7330 | 332 aa hypothetical protein | |||
| 7415 | type II toxin-antitoxin system Phd/YefM family | |||
| 7420 | M | M.LfeRC4ORF8465P (78% identity) | M.LgaVSI47ORF7420P | |
| 7425 | 208 aa hypothetical protein | |||
| plasmid pLgVSI47_1 | ||||
| 9525 | 682 aa hypothetical protein | |||
| 9530 | M | M.Lga637ORF9320P (100% identity) | M.LgaVSI47ORF9530P | |
| 9535 | 152 aa hypothetical protein | |||