Pantoea agglomerans CB1 |
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Putative Pantoea agglomerans CB1 RM systems
Ref: Asselin,J.E. and Stodghill,P.V. unpublished
REBASE ref # 36328
Complete sequence: 4,145,235 bp
GenBank #: CP084197
REBASE acronym: PagCB1
Org_num: 65493
All begin LDO72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14730 | AAA family ATPase | |||
| 14735 | S | S.EsaSS290ORFAP (72% identity) | S.PagCB1ORF14740P | |
| 14740 | M | M.EaeDDE1ORF11600P (97% identity) | M.PagCB1ORF14740P | |
| 14745 | R | YenGp200ORF17635P (96% identity) | PagCB1ORF14740P | |
| 14750 | tyrosine-type recombinase/integrase | |||
| 17105 | 300 aa hypothetical protein | |||
| 17110 | R | Csp727ORF11520P (97% identity) | PagCB1ORF17130P | |
| 17115 | S | S.Csp727ORF11520P (97% identity) | S.PagCB1ORF17130P | |
| 17120 | ATP-dependent helicase | |||
| 17125 | AAA family ATPase | |||
| 17130 | M | M2.Esp2366ORF14155P (96% identity) | M2.PagCB1ORF17130P | |
| 17135 | M | M1.YpsM489ORF8225P (98% identity) | M1.PagCB1ORF17130P | |
| 17140 | integrase arm-type DNA-binding domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1935 | SPOR domain-containing protein | |||
| 1940 | M | M.PagTx10DamP (100% identity) | GATC | M.PagCB1DamP |
| 1945 | ribulose-phosphate 3-epimerase | |||
| 3905 | 3-5 exonuclease | |||
| 3910 | M | M.PagPa58ORF3850P (92% identity) | M.PagCB1ORF3910P | |
| 3915 | replication endonuclease | |||
| 5860 | 112 aa hypothetical protein | |||
| 5865 | M | M.Pva989ORF11580P (89% identity) | M.PagCB1ORF5865P | |
| 5870 | 185 aa hypothetical protein | |||