Xanthomonas campestris pv. campestris 11085 |
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Putative Xanthomonas campestris pv. campestris 11085 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
Complete sequence: 5,095,350 bp
GenBank #: CP066970
REBASE acronym: Xca11085
Org_num: 65581
All begin JH300_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6085 | M48 family metallopeptidase | |||
| 6090 | R | XcaXY11ORF6160P (100% identity) | CAAGNNNNNCTTA | Xca11085ORF6105P |
| 6095 | S | S.Xcacc2ORF6130P (100% identity) | CAAGNNNNNCTTA | S.Xca11085ORF6105P |
| 6100 | damage-inducible protein D | |||
| 6105 | M | M.Xcacc2ORF6130P (100% identity) | CAAGNNNNNCTTA | M.Xca11085ORF6105P |
| 6110 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3030 | IS3-like element IS1404 family transposase | |||
| 3035 | R | XcaYORFAP (98% identity) | Xca11085ORF3035P | |
| 3040 | 90 aa hypothetical protein | |||
| 10515 | AAA family ATPase | |||
| 10520 | M | M.XcaYORFEP (48% identity) | M.Xca11085ORF10520P | |
| 10525 | DNA topoisomerase III | |||
| 21490 | IS3 family transposase | |||
| 21495 | M | M.Xca8305ORF21175P (100% identity) | M.Xca11085ORF21495P | |
| 21500 | thymidine kinase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15945 | ATP-dependent helicase | |||
| 15950 | M | M.XcaXc86ORFDP (100% identity) | M.Xca11085ORF15950P | |
| 15955 | R | XcaXc86ORFDP (100% identity) | Xca11085ORF15950P | |
| 15960 | type II toxin-antitoxin system RelE/ParE family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6970 | 71 aa hypothetical protein | |||
| 6975 | R | Xcacc2McrBP (100% identity) | Xca11085McrBP | |
| 6980 | R | Xcacc2McrCP (100% identity) | Xca11085McrCP | |
| 6985 | sensor histidine kinase | |||