|
Putative Xanthomonas campestris pv. campestris 08305 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
Complete sequence: 5,024,247 bp
GenBank #: CP066966
REBASE acronym: Xca8305
Org_num: 65575
All begin JH275_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2415 | 121 aa hypothetical protein | |||
2420 | R | Xcacc2ORF2325P (100% identity) | Xca8305ORF2440P | |
2425 | S | S.Xcacc2ORF2325P (100% identity) | S.Xca8305ORF2440P | |
2430 | AAA family ATPase | |||
2435 | virulence RhuM family protein | |||
2440 | M | M.Xcacc2ORF2325P (100% identity) | M.Xca8305ORF2440P | |
2445 | aminodeoxychorismate/anthranilate synthase | |||
6270 | M48 family metallopeptidase | |||
6275 | R | Xca983ORF6240P (100% identity) | Xca8305ORF6290P | |
6280 | S | S3.Xca983ORF6240P (100% identity) | S2.Xca8305ORF6290P | |
6285 | virulence RhuM family protein | |||
6290 | M | M.Xca983ORF6240P (100% identity) | M.Xca8305ORF6290P | |
6295 | S | S1.Xca983ORF6240P (100% identity) | S1.Xca8305ORF6290P | |
6300 | 86 aa hypothetical protein | |||
15740 | 98 aa hypothetical protein | |||
15745 | R | Xcacc2ORF16555P (89% identity) | GAGNNNNNNGTGC | Xca8305ORF15760P |
15750 | S | S.Xcacc2ORF16555P (100% identity) | GAGNNNNNNGTGC | S.Xca8305ORF15760P |
15755 | virulence RhuM family protein | |||
15760 | M | M.Xcacc2ORF16555P (21% identity) | GAGNNNNNNGTGC | M.Xca8305ORF15760BP |
15765 | IS5-like element IS1478 family transposase | |||
15770 | M | M.Xcacc2ORF16555P (78% identity) | GAGNNNNNNGTGC | M.Xca8305ORF15760AP |
15775 | Mrr restriction system protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
340 | 207 aa hypothetical protein | |||
345 | M | M.XcaCN05aORFFP (100% identity) | M.Xca8305ORF345P | |
350 | 279 aa hypothetical protein | |||
3085 | IS3-like element IS1404 family transposase | |||
3090 | R | Xcacc2ORF20495P (98% identity) | Xca8305ORF3090P | |
3095 | 90 aa hypothetical protein | |||
21170 | IS3 family transposase | |||
21175 | M | M.Xca8290ORF21610P (100% identity) | M.Xca8305ORF21175P | |
21180 | thymidine kinase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
7140 | 71 aa hypothetical protein | |||
7145 | R | Xcacc2McrBP (100% identity) | Xca8305McrBP | |
7150 | R | Xcacc2McrCP (100% identity) | Xca8305McrCP | |
7155 | sensor histidine kinase | |||
15770 | SAM-dependent DNA methyltransferase | |||
15775 | R | Xcacc2MrrP (100% identity) | Xca8305MrrP | |
15780 | type II toxin-antitoxin system RelE/ParE family |