Xanthomonas campestris pv. incanae 5057 |
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Putative Xanthomonas campestris pv. incanae 5057 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
Complete sequence: 5,065,922 bp
GenBank #: CP066961
REBASE acronym: Xca5057
Org_num: 65611
All begin JH262_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6215 | 287 aa hypothetical protein | |||
| ??? | S | S2.Xca8284ORF6340P (57% identity) | S3.Xca5057ORF6275P | |
| 6225 | SDR family oxidoreductase | |||
| 6230 | TetR/AcrR family transcriptional regulator | |||
| 6235 | 348 aa hypothetical protein | |||
| 6240 | 72 aa hypothetical protein | |||
| 6245 | 462 aa hypothetical protein | |||
| 6250 | 87 aa hypothetical protein | |||
| 6255 | type II toxin-antitoxin system RelE/ParE family | |||
| 6260 | R | Xar1494ORF1187P (99% identity) | Xca5057ORF6275P | |
| 6265 | transcriptional regulator | |||
| 6270 | 240 aa hypothetical protein | |||
| 6275 | M | M.Xci7111ORF18480P (97% identity) | M.Xca5057ORF6275P | |
| 6280 | S | S.PpuL2890ORF24920P (55% identity) | S1.Xca5057ORF6275P | |
| 6285 | IS30 family transposase | |||
| 6290 | S | S.Xor1513ORF6495P (53% identity) | S2.Xca5057ORF6275P | |
| 6295 | IS30 family transposase | |||
| 15890 | 86 aa hypothetical protein | |||
| 15895 | S | S1.Xca814ORF15750P (97% identity) | S1.Xca5057ORF15900P | |
| 15900 | M | M.Xca814ORF15750P (99% identity) | M.Xca5057ORF15900P | |
| 15905 | damage-inducible protein D | |||
| 15910 | virulence RhuM family protein | |||
| 15915 | S | S2.Xca1606ORF6270P (97% identity) | S2.Xca5057ORF15900P | |
| 15920 | R | Xca424ORF6005P (99% identity) | Xca5057ORF15900P | |
| 15925 | M48 family metallopeptidase | |||
| 19775 | aminodeoxychorismate/anthranilate synthase | |||
| 19780 | M | M.Xca3054ORF13935P (98% identity) | M.Xca5057ORF19780P | |
| 19785 | virulence RhuM family protein | |||
| 19790 | AAA family ATPase | |||
| 19795 | S | S.Xca10006ORF2440P (100% identity) | S.Xca5057ORF19780P | |
| 19800 | R | Xci965ORF2610P (95% identity) | Xca5057ORF19780P | |
| 19805 | 121 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1965 | ATP-binding protein | |||
| 1970 | RM | Xpr383ORF2205BP (33% identity) | Xca5057ORF1970P | |
| 1975 | 3-5 exoribonuclease | |||
| 2785 | 273 aa hypothetical protein | |||
| 2790 | R | R2.Xca983ORF19460P (100% identity) | R1.Xca5057ORF2800P | |
| 2795 | R | R1.Xca983ORF19460P (100% identity) | R2.Xca5057ORF2800P | |
| 2800 | M | M.Xca983ORF19460P (100% identity) | M.Xca5057ORF2800P | |
| 2805 | AHH domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21030 | alpha/beta fold hydrolase | |||
| 21035 | R | Xca3139ORF1635P (99% identity) | Xca5057ORF21040P | |
| 21040 | M | M.XcaCN16ORFAP (99% identity) | M.Xca5057ORF21040P | |
| 21045 | Fic family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15010 | sensor histidine kinase | |||
| 15015 | R | XcaCN13aMcrCP (100% identity) | Xca5057McrCP | |
| 15020 | R | Xca983McrBP (99% identity) | Xca5057McrBP | |
| 15025 | 71 aa hypothetical protein | |||