Xanthomonas campestris 11-19 |
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Putative Xanthomonas campestris 11-19 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
Complete sequence: 5,177,110 bp
GenBank #: CP066958
REBASE acronym: Xca1119
Org_num: 65564
All begin JH302_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5970 | 243 aa hypothetical protein | |||
| ??? | S | S2.Xca3054ORF5535P (50% identity) | S3.Xca1119ORF6055P | |
| 5985 | 273 aa hypothetical protein | |||
| 5990 | 127 aa hypothetical protein | |||
| 5995 | MarR family transcriptional regulator | |||
| 6000 | 188 aa hypothetical protein | |||
| 6005 | 87 aa hypothetical protein | |||
| 6010 | type II toxin-antitoxin system RelE/ParE family | |||
| 6015 | R | Xca4053ORF5750P (98% identity) | Xca1119ORF6055P | |
| 6020 | DNA damage-inducible protein D | |||
| 6025 | 72 aa hypothetical protein | |||
| 6030 | S | S.XtrKm8ORF10955P (42% identity) | S2.Xca1119ORF6055P | |
| 6035 | IS5 family transposase | |||
| 6040 | S | S.Pex17835ORF3267P (19% identity) | S1.Xca1119ORF6055P | |
| 6045 | AAA family ATPase | |||
| 6050 | 63 aa hypothetical protein | |||
| 6055 | M | M.Xca8497ORF16720P (98% identity) | M.Xca1119ORF6055P | |
| 6060 | 98 aa hypothetical protein | |||
| 16080 | 86 aa hypothetical protein | |||
| 16085 | S | S1.Xca983ORF6240P (100% identity) | S1.Xca1119ORF16090P | |
| 16090 | M | M.Xca983ORF6240P (100% identity) | M.Xca1119ORF16090P | |
| 16095 | virulence RhuM family protein | |||
| ??? | S | S2.Xca3054ORF5535P (78% identity) | S2.Xca1119ORF16090P | |
| ??? | restriction endonuclease subunit S | |||
| 16105 | R | Xca983ORF6240P (100% identity) | Xca1119ORF16090P | |
| 16110 | M48 family metallopeptidase | |||
| 20230 | aminodeoxychorismate/anthranilate synthase | |||
| 20235 | M | M.Xca424ORF18950P (99% identity) | M.Xca1119ORF20235P | |
| 20240 | virulence RhuM family protein | |||
| 20245 | AAA family ATPase | |||
| 20250 | S | S.Xcacc2ORF2325P (100% identity) | S.Xca1119ORF20235P | |
| 20255 | R | Xca5824ORF19635P (100% identity) | Xca1119ORF20235P | |
| 20260 | 121 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9585 | AAA family ATPase | |||
| ??? | M | M.XciT21ORF12030P (100% identity) | M.Xca1119ORF9590P | |
| 9595 | topoisomerase DNA-binding C4 zinc finger | |||
| 11275 | DEAD/DEAH box helicase | |||
| 11280 | RM | Xho2001ORF17555P (100% identity) | Xca1119ORF11280P | |
| 11285 | XRE family transcriptional regulator | |||
| 11345 | DNA topoisomerase III | |||
| 11350 | M | M.Xho2001ORF17625P (100% identity) | M.Xca1119ORF11350P | |
| 11355 | 70 aa hypothetical protein | |||
| 19675 | ParB-like nuclease domain-containing protein | |||
| 19680 | M | M.Xca5824ORF19090P (100% identity) | M.Xca1119ORF19680P | |
| 19685 | pyruvate dehydrogenase (acetyl-transferring), | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15215 | sensor histidine kinase | |||
| 15220 | R | XcaCN13aMcrCP (100% identity) | Xca1119McrCP | |
| 15225 | R | Xcacc2McrBP (51% identity) | Xca1119McrBP | |
| 15230 | IS3 family transposase | |||