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Putative Xanthomonas campestris pv. campestris 08284 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
Complete sequence: 5,012,081 bp
GenBank #: CP066945
REBASE acronym: Xca8284
Org_num: 65572
All begin JH306_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
6290 | 163 aa hypothetical protein | |||
??? | S | S3.Xca8305ORF6290P (94% identity) | S3.Xca8284ORF6340P | |
6300 | 76 aa hypothetical protein | |||
6305 | exo-alpha-sialidase | |||
6310 | RebB family R body protein | |||
6315 | 71 aa hypothetical protein | |||
6320 | M48 family metallopeptidase | |||
6325 | R | XcaCN13ORFCP (95% identity) | Xca8284ORF6340P | |
6330 | S | S.Xcacc2ORF6130P (100% identity) | CAAGNNNNNCTTA | S1.Xca8284ORF6340P |
6335 | damage-inducible protein D | |||
6340 | M | M.Xcacc2ORF6130P (99% identity) | M.Xca8284ORF6340P | |
6345 | restriction endonuclease subunit S | |||
6350 | 86 aa hypothetical protein | |||
6355 | type III secretion system effector protein XopK | |||
??? | S | S2.Xca108GORF15645P (79% identity) | S2.Xca8284ORF6340P | |
6370 | 173 aa hypothetical protein | |||
15685 | 98 aa hypothetical protein | |||
15690 | R | Xca5817ORFDP (89% identity) | Xca8284ORF15705P | |
15695 | S | S.XcaTJORFEP (74% identity) | S.Xca8284ORF15705P | |
15700 | virulence RhuM family protein | |||
15705 | M | M.Xca3077ORF7585P (99% identity) | M.Xca8284ORF15705P | |
15710 | Mrr restriction system protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3030 | IS3-like element IS1404 family transposase | |||
3035 | R | XcaYORFAP (98% identity) | Xca8284ORF3035P | |
3040 | 90 aa hypothetical protein | |||
5265 | 860 aa hypothetical protein | |||
5270 | M | M.Xca474ORF5255P (100% identity) | M.Xca8284ORF5270P | |
5275 | AIPR family protein | |||
5280 | PD-(D/E)XK motif protein | |||
5285 | Z1 domain-containing protein | |||
5290 | ATP-binding protein | |||
5295 | V | V.Xca662ORF16645P (100% identity) | V.Xca8284ORF5270P | |
5300 | HNH endonuclease | |||
10045 | glutamine-hydrolyzing GMP synthase | |||
10050 | RM | Xca331ORF10155P (99% identity) | Xca8284ORF10050P | |
10055 | DEAD/DEAH box helicase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
7225 | 71 aa hypothetical protein | |||
7230 | R | Xcacc2McrBP (100% identity) | Xca8284McrBP | |
7235 | R | XcaCN13aMcrCP (100% identity) | Xca8284McrCP | |
7240 | sensor histidine kinase | |||
15705 | SAM-dependent DNA methyltransferase | |||
15710 | R | Xcacc2MrrP (100% identity) | Xca8284MrrP | |
15715 | type II toxin-antitoxin system RelE/ParE family |