Xanthomonas campestris pv. campestris 42-2 |
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Putative Xanthomonas campestris pv. campestris 42-2 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
Complete sequence: 4,982,582 bp
GenBank #: CP066988
REBASE acronym: Xca422
Org_num: 65599
All begin JH305_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6145 | type II toxin-antitoxin system RelE/ParE family | |||
| 6150 | R | Xca8497ORF16720P (100% identity) | Xca422ORF6165P | |
| 6155 | S | S.Xca8497ORF16720P (100% identity) | S.Xca422ORF6165P | |
| 6160 | AAA family ATPase | |||
| 6165 | M | M.Xca8497ORF16720P (100% identity) | M.Xca422ORF6165P | |
| 6170 | 98 aa hypothetical protein | |||
| 15685 | restriction endonuclease subunit S | |||
| 15690 | M | M.Xcacc2ORF6130P (100% identity) | M.Xca422ORF15690P | |
| 15695 | damage-inducible protein D | |||
| 15700 | virulence RhuM family protein | |||
| 15705 | S | S.Xca424ORF6005P (100% identity) | S.Xca422ORF15690P | |
| 15710 | R | Xca424ORF6005P (100% identity) | Xca422ORF15690P | |
| 15715 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11300 | DNA topoisomerase III | |||
| 11305 | M | M.XcaYORFEP (48% identity) | M.Xca422ORF11305P | |
| 11310 | AAA family ATPase | |||
| 11950 | IS3-like element IS476 family transposase | |||
| 11955 | M | M.Xca424ORF9745P (100% identity) | M.Xca422ORF11955P | |
| 11960 | glutamine-hydrolyzing GMP synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3060 | DNA binding domain-containing protein | |||
| 3065 | M | M.Xca424ORF18625P (100% identity) | M.Xca422ORF3065P | |
| 3070 | R | Xca424ORF18625P (100% identity) | Xca422ORF3065P | |
| 3075 | IS3-like element IS476 family transposase | |||