Xanthomonas cucurbitae OH_261 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xanthomonas cucurbitae OH_261 RM systems
Ref: Hind,S.R. unpublished
REBASE ref # 29768
Complete sequence: 4,755,023 bp
GenBank #: CP082214
REBASE acronym: Xcu261
Org_num: 65623
All begin K6978_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4910 | M1 family metallopeptidase | |||
| 4915 | S | S.Xcu206ORF4925P (100% identity) | S.Xcu261ORF4920P | |
| 4920 | M | M.Xcu206ORF4925BP (100% identity) | M.Xcu261ORF4920BP | |
| ??? | M | M.Xcu359ORF4630AP (100% identity) | M.Xcu261ORF4920AP | |
| 4930 | R | Xcu206ORF4925P (100% identity) | Xcu261ORF4920P | |
| 4935 | 77 aa hypothetical protein | |||
| 14165 | 86 aa hypothetical protein | |||
| 14170 | S | S1.Xcu456ORF5330P (100% identity) | S1.Xcu261ORF14175P | |
| 14175 | M | M.Xcu456ORF5330P (100% identity) | M.Xcu261ORF14175P | |
| 14180 | damage-inducible protein D | |||
| 14185 | virulence RhuM family protein | |||
| 14190 | S | S2.Xcu359ORF13505P (100% identity) | S2.Xcu261ORF14175P | |
| 14195 | R | Xcu206ORF14205P (100% identity) | Xcu261ORF14175P | |
| 14200 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 815 | 69 aa hypothetical protein | |||
| 820 | R | Xcu206ORF835P (100% identity) | Xcu261ORF830P | |
| 825 | helix-turn-helix domain-containing protein | |||
| 830 | M | M.Xcu206ORF835P (100% identity) | M.Xcu261ORF830P | |
| 835 | 79 aa hypothetical protein | |||
| 6320 | 170 aa hypothetical protein | |||
| 6325 | M | M.Xcu206ORF6340P (100% identity) | M.Xcu261ORF6325P | |
| 6330 | 261 aa hypothetical protein | |||
| 6875 | XRE family transcriptional regulator | |||
| 6880 | RM | Xcu206ORF6900P (100% identity) | Xcu261ORF6880P | |
| 6885 | DEAD/DEAH box helicase | |||
| 12120 | 78 aa hypothetical protein | |||
| 12125 | M | M.Xcu206ORF12155P (100% identity) | M.Xcu261ORF12125P | |
| 12130 | 90 aa hypothetical protein | |||
| 15230 | ferric-rhodotorulic acid/ferric-coprogen | |||
| 15235 | M | M.Xcu206ORF15265P (100% identity) | M.Xcu261ORF15235P | |
| 15240 | 261 aa hypothetical protein | |||
| 19230 | 141 aa hypothetical protein | |||
| 19235 | R | Xcu456ORF510P (97% identity) | Xcu261ORF19245P | |
| 19240 | helix-turn-helix domain-containing protein | |||
| 19245 | M | M.Xcu456ORF510P (100% identity) | M.Xcu261ORF19245P | |
| 19250 | hemolysin III family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6905 | transposase | |||
| 6910 | R | Xcu206GmrSDP (100% identity) | Xcu261GmrSDP | |
| 6915 | site-specific integrase | |||