Escherichia coli CM2010-0578/1 |
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Putative Escherichia coli CM2010-0578/1 RM systems
Ref: Saliha,U. et al. unpublished
REBASE ref # 36244
| Sequence length: | GenBank #: | |
| Chromosome: | 4,983,642 bp | CP087564 |
| plasmid p10_578_3: | 99,008 bp | CP087567 |
REBASE acronym: Eco5781
Org_num: 65256
All begin LOF66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10220 | transposase domain-containing protein | |||
| 10225 | M | M.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | M.Eco5781ORF10225P |
| 10230 | AAA family ATPase | |||
| 10235 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.Eco5781ORF10225P |
| 10240 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | Eco5781ORF10225P |
| 10245 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3830 | 95 aa hypothetical protein | |||
| 3835 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco5781ORF3835P | |
| 3840 | DUF977 family protein | |||
| 6135 | drug/metabolite exporter YedA | |||
| 6140 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco5781DcmP |
| 6145 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.Eco5781DcmP |
| 6150 | phosphohydrolase | |||
| 8550 | NinE family protein | |||
| 8555 | M | M.Eco972ORF7485P (99% identity) | GATC | M.Eco5781ORF8555P |
| 8560 | recombination protein NinB | |||
| 13500 | DNA-binding transcriptional regulator Fis | |||
| 13505 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco5781ORF13505P |
| 13510 | DUF2556 family protein | |||
| 14125 | ribulose-phosphate 3-epimerase | |||
| 14130 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5781DamP |
| 14135 | cell division protein DamX | |||
| 17715 | PerC family transcriptional regulator | |||
| 17720 | M | M.Sso90ORF15820P (99% identity) | GATC | M.Eco5781ORF17720P |
| 17725 | LexA family transcriptional regulator | |||
| 24100 | DUF2732 domain-containing protein | |||
| 24105 | M | M.Eco3934ORF14805P (100% identity) | M.Eco5781ORF24105P | |
| 24110 | replication endonuclease | |||
| plasmid p10_578_3 | ||||
| 26595 | SPFH/Band 7/PHB domain protein | |||
| 26025 | M | M.Eco190MORF25745P (100% identity) | M.Eco5781ORF26025P | |
| 26030 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15655 | IS3-like element ISSen4 family transposase | |||
| 15660 | R | SflN97McrCP (100% identity) | Eco5781McrCP | |
| 15665 | R | Kpn0718McrBP (100% identity) | Eco5781McrBP | |
| 15670 | DUF4942 domain-containing protein | |||