Escherichia coli APEC E956 |
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Putative Escherichia coli APEC E956 RM systems
Ref: Saliha,U. et al. unpublished
REBASE ref # 36244
Complete sequence: 4,884,398 bp
GenBank #: CP087294
REBASE acronym: EcoE956
Org_num: 65255
All begin LO740_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2560 | endoribonuclease SymE | |||
| 2565 | R | Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | EcoE956ORF2575P |
| 2570 | S | S.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | S.EcoE956ORF2575P |
| 2575 | M | M.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | M.EcoE956ORF2575P |
| 2580 | restriction endonuclease | |||
| 18170 | lactate utilization protein C | |||
| 18175 | R | EcoW087ORF4400P (100% identity) | EcoE956ORF18185P | |
| 18180 | S | S.EcoWH398ORF26840P (99% identity) | S.EcoE956ORF18185P | |
| 18185 | M | M.Ecos641ORF18845P (99% identity) | M.EcoE956ORF18185P | |
| 18190 | DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2380 | peptidase | |||
| 2385 | R | SflFF17ORF19275P (100% identity) | EcoE956ORF2385P | |
| 2390 | HNH endonuclease | |||
| 6820 | recombination protein NinB | |||
| 6825 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoE956ORF6825P |
| 6830 | NinE family protein | |||
| 13090 | drug/metabolite exporter YedA | |||
| 13095 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoE956DcmP |
| 13100 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoE956DcmP |
| 13105 | phosphohydrolase | |||
| 20095 | DNA-binding transcriptional regulator Fis | |||
| 20100 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoE956ORF20100P |
| 20105 | DUF2556 family protein | |||
| 20695 | ribulose-phosphate 3-epimerase | |||
| 20700 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoE956DamP |
| 20705 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2575 | type I restriction-modification system subunit | |||
| 2580 | R | EfeE4C07MrrP (100% identity) | EcoE956MrrP | |
| 2585 | BrnT family toxin | |||