Xanthomonas campestris pv. campestris 13108G |
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Putative Xanthomonas campestris pv. campestris 13108G RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
| Sequence length: | GenBank #: | |
| Chromosome: | 5,054,599 bp | CP066937 |
| plasmid unnamed: | 160,365 bp | CP066938 |
REBASE acronym: Xca108G
Org_num: 65183
All begin JH313_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2445 | 121 aa hypothetical protein | |||
| 2450 | R | Xcacc2ORF2325P (100% identity) | Xca108GORF2470P | |
| 2455 | S | S.Xcacc2ORF2325P (100% identity) | S.Xca108GORF2470P | |
| 2460 | AAA family ATPase | |||
| 2465 | virulence RhuM family protein | |||
| 2470 | M | M.Xcacc2ORF2325P (100% identity) | M.Xca108GORF2470P | |
| 2475 | aminodeoxychorismate/anthranilate synthase | |||
| 6235 | M48 family metallopeptidase | |||
| 6240 | R | XcaCN13ORFCP (95% identity) | CAAGNNNNNCTTA | Xca108GORF6255P |
| 6245 | S | S.Xcacc2ORF6130P (100% identity) | CAAGNNNNNCTTA | S.Xca108GORF6255P |
| 6250 | damage-inducible protein D | |||
| 6255 | M | M.XcaTJORFBP (100% identity) | CAAGNNNNNCTTA | M.Xca108GORF6255P |
| 6260 | restriction endonuclease subunit S | |||
| 15620 | 98 aa hypothetical protein | |||
| 15625 | R | Xca2021ORF32310P (89% identity) | Xca108GORF15645P | |
| ??? | S | S.Xcacc2ORF16555P (34% identity) | S3.Xca108GORF15645P | |
| ??? | S | S2.Xca8284ORF6340P (79% identity) | S2.Xca108GORF15645P | |
| 15635 | S | S2.XcaCN18ORFBP (57% identity) | S1.Xca108GORF15645P | |
| 15640 | virulence RhuM family protein | |||
| 15645 | M | M.XcaCN16ORFCP (99% identity) | M.Xca108GORF15645P | |
| 15650 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11430 | IS5 family transposase | |||
| 11435 | M | M.XcaCN13aORFCP (100% identity) | GTCGAC | M.Xca108GORF11435P |
| 11440 | AAA family ATPase | |||
| ??? | R | XcaCN13aORFCP (47% identity) | Xca108GORF11435P | |
| 11455 | 316 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 22180 | 192 aa hypothetical protein | |||
| 22185 | M | M.Xca12112ORF22255P (100% identity) | M.Xca108GORF22185P | |
| 22190 | recombination-associated protein RdgC | |||
| 22235 | 214 aa hypothetical protein | |||
| 22240 | M | M.Xca12112ORF22200P (100% identity) | M.Xca108GORF22240P | |
| 22245 | 265 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7110 | 71 aa hypothetical protein | |||
| 7115 | R | Xca5817McrBP (100% identity) | Xca108GMcrBP | |
| 7120 | R | XcaCN13aMcrCP (85% identity) | Xca108GMcrCP | |
| 7125 | IS5-like element IS1478 family transposase | |||
| 15645 | SAM-dependent DNA methyltransferase | |||
| 15650 | R | XcaYMrrP (99% identity) | Xca108GMrrP | |
| 15655 | type II toxin-antitoxin system RelE/ParE family | |||