Xylella fastidiosa ICMP 8731 |
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Putative Xylella fastidiosa ICMP 8731 RM systems
Ref: Kant,P. et al. unpublished
REBASE ref # 36209
Complete sequence: 2,409,646 bp
GenBank #: CP117821
REBASE acronym: Xfa8731
Org_num: 65184
All begin PT013_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10370 | 62 aa hypothetical protein | |||
| 10375 | R | Xfav13ORF11050P (100% identity) | GATCNNNNNNNTGC | Xfa8731ORF10385P |
| 10380 | S | S.Xfav13ORF11050P (100% identity) | GATCNNNNNNNTGC | S.Xfa8731ORF10385P |
| 10385 | M | M.Xfav13ORF11050P (100% identity) | GATCNNNNNNNTGC | M.Xfa8731ORF10385P |
| 10390 | HNH endonuclease family protein | |||
| 10390 | HNH endonuclease family protein | |||
| 10395 | R | Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | Xfa8731ORF10410P |
| 10400 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.Xfa8731ORF10410P |
| 10405 | 88 aa hypothetical protein | |||
| 10410 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.Xfa8731ORF10410P |
| 10415 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2640 | ATP-binding protein | |||
| 2645 | M | M.Xfav13ORF3100P (100% identity) | GTCGAC | M.Xfa8731ORF2645P |
| 2650 | R | R1.Xfav13ORF3100P (100% identity) | GTCGAC | R1.Xfa8731ORF2645P |
| 2655 | R | R2.Xfav13ORF3100P (100% identity) | GTCGAC | R2.Xfa8731ORF2645P |
| 2660 | uroporphyrinogen decarboxylase | |||
| 5130 | 50 aa hypothetical protein | |||
| ??? | M | M.Xfav13ORF5610P (100% identity) | GCATGC | M.Xfa8731ORF5135P |
| 5145 | Ax21 family protein | |||
| 6565 | 60 aa hypothetical protein | |||
| 6570 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa8731ORF6570P | |
| 6575 | excinuclease ABC subunit UvrC | |||
| 6635 | low molecular weight phosphotyrosine protein | |||
| 6640 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa8731ORF6640P | |
| 6645 | type II toxin-antitoxin system RelE/ParE family | |||
| 8015 | 41 aa hypothetical protein | |||
| 8020 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfa8731ORF8020P |
| 8025 | R | XfasSLORF8640P (100% identity) | TTCGAA | Xfa8731ORF8020P |
| 8030 | 69 aa hypothetical protein | |||
| 8225 | DNA primase | |||
| ??? | R | Xfav13ORF8800P (100% identity) | Xfa8731ORF8235P | |
| ??? | M | M.Xfav13ORF8800P (100% identity) | M.Xfa8731ORF8235P | |
| 8245 | tryptophan--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3985 | 3-oxoacyl-ACP synthase III | |||
| 3990 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa8731ORF3990P | |
| 3995 | R | Xfav13ORF4440P (100% identity) | Xfa8731ORF3990P | |
| 4000 | alpha/beta fold hydrolase | |||