Xylella fastidiosa ICMP 8740 |
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Putative Xylella fastidiosa ICMP 8740 RM systems
Ref: Kant,P. et al. unpublished
REBASE ref # 36209
Complete sequence: 2,548,838 bp
GenBank #: CP117820
REBASE acronym: Xfa8740
Org_num: 65185
All begin PT012_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1220 | M48 family metallopeptidase | |||
| ??? | R | XfaESVLORF1195P (92% identity) | Xfa8740ORF1240P | |
| ??? | S | S2.XfaY3CORF1215P (100% identity) | S2.Xfa8740ORF1240P | |
| 1235 | S | S.XfaSyVAORF1729P (99% identity) | S1.Xfa8740ORF1240P | |
| ??? | M | M.XfaRiv5ORF1215P (100% identity) | M.Xfa8740ORF1240P | |
| 1255 | 57 aa hypothetical protein | |||
| 11110 | 77 aa hypothetical protein | |||
| 11115 | R | XfaRiv5ORF10665P (99% identity) | Xfa8740ORF11125P | |
| 11120 | S | S.Xfav25ORF11835P (98% identity) | S.Xfa8740ORF11125P | |
| 11125 | M | M.XfaSyVAORF2553P (94% identity) | M.Xfa8740ORF11125P | |
| 11130 | HNH endonuclease family protein | |||
| 11130 | HNH endonuclease family protein | |||
| 11135 | R | XfaRiv5ORF10690P (99% identity) | Xfa8740ORF11150P | |
| 11140 | S | S.XfaORF2728P (49% identity) | S.Xfa8740ORF11150P | |
| 11145 | 87 aa hypothetical protein | |||
| 11150 | M | M.XfaY3CORF10835P (100% identity) | M.Xfa8740ORF11150P | |
| 11155 | LysE family translocator | |||
| 11205 | 67 aa hypothetical protein | |||
| 11210 | R | XfaEM3ORF10655P (100% identity) | Xfa8740ORF11225P | |
| 11215 | 191 aa hypothetical protein | |||
| 11220 | S | S.XfaESVLORF11320P (99% identity) | S.Xfa8740ORF11225P | |
| 11225 | M | M.XfaSyVAORF2573P (100% identity) | M.Xfa8740ORF11225P | |
| 11230 | 67 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2040 | lysozyme | |||
| 2045 | M | M.XfaReb6ORFEP (99% identity) | M.Xfa8740ORF2045P | |
| 2050 | type II toxin-antitoxin system HicB family | |||
| 6025 | 132 aa hypothetical protein | |||
| 6030 | M | M.XfaSyVAORF2398P (100% identity) | M.Xfa8740ORF6030P | |
| 6035 | 42 aa hypothetical protein | |||
| 6170 | integrase | |||
| 6175 | R | XfaCO33ORF11520P (100% identity) | RGATCY | Xfa8740ORF6180P |
| 6180 | M | M.XfaCO33ORF11520P (100% identity) | RGATCY | M.Xfa8740ORF6180P |
| 6185 | 60 aa hypothetical protein | |||
| 6325 | lysozyme | |||
| 6330 | M | M.Xfa35874ORF2005P (100% identity) | M.Xfa8740ORF6330P | |
| 6335 | 232 aa hypothetical protein | |||
| 7120 | SNF2-related protein | |||
| 7125 | M | M.XfaY3CORF4240P (97% identity) | M.Xfa8740ORF7125P | |
| 7130 | lysozyme | |||
| 8015 | 65 aa hypothetical protein | |||
| 8025 | M | M.XfaY3CORF8005P (100% identity) | CGTACG | M.Xfa8740ORF8025P |
| 8030 | R | XfaY3CORF8005P (100% identity) | CGTACG | Xfa8740ORF8025P |
| 8035 | 52 aa hypothetical protein | |||
| 8455 | 148 aa hypothetical protein | |||
| ??? | M | M.XfaSyVAORF1958P (100% identity) | GCATGC | M.Xfa8740ORF8460P |
| 8470 | R | XfaESVLORF8510P (100% identity) | GCATGC | Xfa8740ORF8460P |
| 8475 | 111 aa hypothetical protein | |||
| 8995 | DNA primase | |||
| ??? | R | XfaEM3ORF8415P (100% identity) | Xfa8740ORF9005P | |
| ??? | M | M.Xfav25ORF2910P (63% identity) | M.Xfa8740ORF9005P | |
| 9015 | site-specific DNA-methyltransferase | |||