Xylella fastidiosa ICMP 8742 |
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Putative Xylella fastidiosa ICMP 8742 RM systems
Ref: Kant,P. et al. unpublished
REBASE ref # 36209
Complete sequence: 2,556,755 bp
GenBank #: CP117823
REBASE acronym: Xfa8742
Org_num: 65186
All begin PUO95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11250 | 62 aa hypothetical protein | |||
| 11255 | R | Xfav13ORF11050P (100% identity) | Xfa8742ORF11265P | |
| 11260 | S | S.XfasSLORF11075P (100% identity) | S.Xfa8742ORF11265P | |
| 11265 | M | M.XfasSLORF11075P (100% identity) | M.Xfa8742ORF11265P | |
| 11270 | HNH endonuclease family protein | |||
| 11270 | HNH endonuclease family protein | |||
| 11275 | R | XfasSLORF11100P (100% identity) | GATCNNNNNNNTGC | Xfa8742ORF11290P |
| 11280 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.Xfa8742ORF11290P |
| 11285 | 87 aa hypothetical protein | |||
| 11290 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.Xfa8742ORF11290P |
| 11295 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2990 | ATP-binding protein | |||
| ??? | M | M.XfasSLORF3075P (100% identity) | M.Xfa8742ORF2995P | |
| 3000 | R | XfasSLORF3075P (100% identity) | GTCGAC | R1.Xfa8742ORF2995P |
| 3005 | 53 aa hypothetical protein | |||
| 3010 | R | R2.XfaWM11ORF3020P (100% identity) | R2.Xfa8742ORF2995P | |
| 3015 | uroporphyrinogen decarboxylase | |||
| 3685 | tryptophan--tRNA ligase | |||
| 3690 | M | M.XfaTORF1649P (30% identity) | M.Xfa8742ORF3690AP | |
| 3695 | M | M.Xfav13ORF8800P (63% identity) | M.Xfa8742ORF3690BP | |
| ??? | R | Xfa35879ORF3930P (100% identity) | Xfa8742ORF3690P | |
| 3705 | DNA primase | |||
| 3900 | 89 aa hypothetical protein | |||
| 3905 | R | Xfav13ORF8585P (100% identity) | TTCGAA | Xfa8742ORF3910P |
| 3910 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfa8742ORF3910P |
| 3915 | 41 aa hypothetical protein | |||
| 5330 | type II toxin-antitoxin system RelE/ParE family | |||
| 5335 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa8742ORF5335P | |
| 5340 | low molecular weight phosphotyrosine protein | |||
| 5405 | 51 aa hypothetical protein | |||
| 5410 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa8742ORF5410P | |
| 5415 | 60 aa hypothetical protein | |||
| 9015 | 50 aa hypothetical protein | |||
| ??? | M | M.Xfav13ORF5610P (100% identity) | GCATGC | M.Xfa8742ORF9020P |
| 9030 | Ax21 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6850 | alpha/beta fold hydrolase | |||
| 6855 | R | XfaWM11ORF4380P (100% identity) | Xfa8742ORF6860P | |
| 6860 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa8742ORF6860P | |
| 6865 | 3-oxoacyl-ACP synthase III | |||