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Putative Escherichia coli MLI106K2 RM systems
Ref: Riediger,M. and Zautner,A.E. unpublished
REBASE ref # 36146
Sequence length: | GenBank #: | |
Chromosome: | 4,981,147 bp | CP117049 |
plasmid p174_MLI106-2: | 174,497 bp | CP117046 |
REBASE acronym: Eco06K2
Org_num: 64907
All begin NL423_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19775 | GTPase family protein | |||
19780 | M | M.Sso8ORF17680P (100% identity) | AAAYNNNNNNCTC | M.Eco06K2ORF19780P |
19785 | S | S.Sso8ORF17680P (100% identity) | AAAYNNNNNNCTC | S.Eco06K2ORF19780P |
19790 | R | Eco06K4ORF19770P (100% identity) | AAAYNNNNNNCTC | Eco06K2ORF19780P |
19795 | IS5-like element ISKpn26 family transposase | |||
21625 | adenine/cytosine-specific restriction | |||
21630 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco06K2ORF21635P |
21635 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco06K2ORF21635P |
21640 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco06K2ORF21635P |
21645 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2775 | cell division protein DamX | |||
2780 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco06K2DamP |
2785 | ribulose-phosphate 3-epimerase | |||
3415 | DUF2556 family protein | |||
3420 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco06K2ORF3420P |
3425 | DNA-binding transcriptional regulator Fis | |||
10655 | helix-turn-helix domain-containing protein | |||
10660 | M | M.Eco06K4ORF10655P (100% identity) | M.Eco06K2ORF10660P | |
10665 | RusA family crossover junction | |||
10905 | phosphohydrolase | |||
10910 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco06K2DcmP |
10915 | V | V.SflSTLE1DcmP (100% identity) | V.Eco06K2DcmP | |
10920 | drug/metabolite exporter YedA | |||
19690 | zinc ribbon domain-containing protein | |||
19695 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco06K2ORF19695P |
19700 | tyrosine-type recombinase/integrase | |||
plasmid p174_MLI106-2 | ||||
900 | 73 aa hypothetical protein | |||
905 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco06K2ORF905P | |
910 | 103 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21620 | GTPase | |||
21625 | R | Ssp28760MrrP (100% identity) | Eco06K2MrrP | |
21630 | type I restriction-modification system |