Haemophilus influenzae 93P12H1 |
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Putative Haemophilus influenzae 93P12H1 RM systems
Ref: Murphy,T.F. et al. unpublished
REBASE ref # 36148
Complete sequence: 1,812,160 bp
GenBank #: CP116397
REBASE acronym: Hin12H1
Org_num: 64924
All begin OQ039_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 235 | peptidase M3 family protein | |||
| 236 | M | M.HinIII3ORF8050P (100% identity) | ACANNNNNNRTTG | M.Hin12H1ORF236P |
| 237 | S | S.HinIII1ORF8070P (100% identity) | ACANNNNNNRTTG | S.Hin12H1ORF236P |
| 238 | AAA domain protein | |||
| 239 | virulence RhuM family protein | |||
| 240 | virulence RhuM family protein | |||
| 241 | R | HinIII3ORF8050P (100% identity) | ACANNNNNNRTTG | Hin12H1ORF236P |
| 242 | 209 aa hypothetical protein | |||
| 1448 | translation initiation factor IF-2 | |||
| 1449 | R | HinIII3ORF13340P (100% identity) | Hin12H1ORF1452P | |
| 1450 | SIR2-like domain protein | |||
| 1451 | S | S.HinR535ORF90P (100% identity) | S.Hin12H1ORF1452P | |
| ??? | M | M.HinR535ORF90P (100% identity) | M.Hin12H1ORF1452P | |
| 1453 | ribosome-binding factor A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 404 | 23S rRNA (uracil-5-)-methyltransferase RumA | |||
| 405 | M | M.HinV1ORF7440P (100% identity) | M.Hin12H1ORF405P | |
| 406 | R | HinIII3ORF6560P (100% identity) | Hin12H1ORF405P | |
| 407 | 205 aa hypothetical protein | |||
| 1308 | 470 aa hypothetical protein | |||
| 1309 | R | HinR2846ORFBP (100% identity) | Hin12H1ORF1310P | |
| 1310 | M | M.HinR2846ORFBP (100% identity) | M.Hin12H1ORF1310P | |
| 1311 | phosphoenolpyruvate carboxylase family protein | |||
| 1704 | 3-phosphoshikimate 1-carboxyvinyltransferase | |||
| 1705 | M | M.HinIII5ORF14360P (100% identity) | CGCG | M.Hin12H1ORF1705P |
| 1706 | R | HinR2846ORFAP (100% identity) | CGCG | Hin12H1ORF1705P |
| 1707 | ATPase related to the helicase subunit | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1134 | alkylhydroperoxidase AhpD family core domain | |||
| 1135 | R | HinIII3ORF16370P (100% identity) | CAKAC | Hin12H1ORF1136P |
| 1136 | M | M.HinIII3ORF16370P (100% identity) | CAKAC | M.Hin12H1ORF1136P |
| 1137 | ribonuclease HII family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 229 | 3-dehydroquinate synthase | |||
| 230 | M | M.HinIII3ORF8110P (100% identity) | GATC | M.Hin12H1ORF230P |
| 231 | PAP2 superfamily protein | |||