Escherichia coli YL03 |
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Putative Escherichia coli YL03 RM systems
Ref: Xu,Q. unpublished
REBASE ref # 29987
| Sequence length: | GenBank #: | |
| Chromosome: | 5,110,834 bp | CP093548 |
| plasmid unnamed1: | 89,988 bp | CP093549 |
| plasmid unnamed2: | 79,537 bp | CP093550 |
REBASE acronym: EcoYL03
Org_num: 64705
All begin MPJ80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19535 | endoribonuclease SymE | |||
| 19540 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoYL03ORF19545P |
| 19545 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoYL03ORF19545P |
| 19550 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoYL03ORF19545P |
| 19555 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6360 | drug/metabolite exporter YedA | |||
| 6365 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoYL03DcmP |
| 6370 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoYL03DcmP |
| 6375 | phosphohydrolase | |||
| 13660 | DNA-binding transcriptional regulator Fis | |||
| 13665 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoYL03ORF13665P |
| 13670 | DUF2556 family protein | |||
| 14190 | ribulose-phosphate 3-epimerase | |||
| 14195 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoYL03DamP |
| 14200 | cell division protein DamX | |||
| plasmid unnamed1 | ||||
| 24570 | 101 aa hypothetical protein | |||
| 24575 | M | M.SflFF3ORF25360P (100% identity) | SAY | M.EcoYL03ORF24575P |
| 24580 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25070 | 97 aa hypothetical protein | |||
| 25075 | M | M.Ssop356ORFAP (100% identity) | M.EcoYL03ORF25075P | |
| 25080 | 73 aa hypothetical protein | |||