Xylella fastidiosa subsp. fastidiosa WM1-1 |
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Putative Xylella fastidiosa subsp. fastidiosa WM1-1 RM systems
Ref: Velasco-Amo,M.D.P. et al. Phytopathology (2022) In press
REBASE ref # 36083
Complete sequence: 2,514,513 bp
GenBank #: CP109890
REBASE acronym: XfaWM11
Org_num: 64695
All begin OK119_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1220 | 67 aa hypothetical protein | |||
| ??? | R | XfasSLORF1215P (100% identity) | XfaWM11ORF1245P | |
| ??? | S | S.XfasSLORF1215P (100% identity) | S.XfaWM11ORF1245P | |
| ??? | M | M.XfaTORF241P (100% identity) | M.XfaWM11ORF1245P | |
| 1265 | 57 aa hypothetical protein | |||
| 10950 | 62 aa hypothetical protein | |||
| 10955 | R | Xfav13ORF11050P (100% identity) | XfaWM11ORF10965P | |
| 10960 | S | S.XfasSLORF11075P (100% identity) | S.XfaWM11ORF10965P | |
| 10965 | M | M.XfasSLORF11075P (100% identity) | M.XfaWM11ORF10965P | |
| 10970 | HNH endonuclease family protein | |||
| 10970 | HNH endonuclease family protein | |||
| 10975 | R | XfasSLORF11100P (100% identity) | GATCNNNNNNNTGC | XfaWM11ORF10990P |
| 10980 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.XfaWM11ORF10990P |
| 10985 | 88 aa hypothetical protein | |||
| 10990 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.XfaWM11ORF10990P |
| 10995 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3015 | ATP-binding protein | |||
| ??? | M | M.XfasSLORF3075P (100% identity) | M.XfaWM11ORF3020P | |
| 3025 | R | XfasSLORF3075P (100% identity) | R1.XfaWM11ORF3020P | |
| 3030 | 53 aa hypothetical protein | |||
| 3035 | R | R2.Xfa8742ORF2995P (100% identity) | R2.XfaWM11ORF3020P | |
| 3040 | uroporphyrinogen decarboxylase | |||
| 6990 | 60 aa hypothetical protein | |||
| 6995 | M | M.Xfav13ORF7095P (100% identity) | M.XfaWM11ORF6995P | |
| 7000 | 51 aa hypothetical protein | |||
| 7065 | low molecular weight phosphotyrosine protein | |||
| 7070 | M | M.Xfav13ORF7170P (100% identity) | M.XfaWM11ORF7070P | |
| 7075 | type II toxin-antitoxin system RelE/ParE family | |||
| 8470 | 41 aa hypothetical protein | |||
| 8475 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.XfaWM11ORF8475P |
| 8480 | R | Xfav13ORF8585P (100% identity) | TTCGAA | XfaWM11ORF8475P |
| 8485 | 89 aa hypothetical protein | |||
| 8685 | 56 aa hypothetical protein | |||
| ??? | R | Xfav13ORF8800P (100% identity) | XfaWM11ORF8695P | |
| ??? | M | M.Xfav13ORF8800P (100% identity) | M.XfaWM11ORF8695P | |
| 8705 | tryptophan--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4375 | 3-oxoacyl-ACP synthase III | |||
| 4380 | M | M.Xfav13ORF4440P (100% identity) | M.XfaWM11ORF4380P | |
| 4385 | R | XfaGV230ORF4300P (100% identity) | XfaWM11ORF4380P | |
| 4390 | alpha/beta fold hydrolase | |||