Xylella fastidiosa subsp. fastidiosa CFBP8083 |
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Putative Xylella fastidiosa subsp. fastidiosa CFBP8083 RM systems
Ref: Velasco-Amo,M.D.P. et al. Phytopathology (2022) In press
REBASE ref # 36083
Complete sequence: 2,515,619 bp
GenBank #: CP109891
REBASE acronym: Xfa8083
Org_num: 64691
All begin OK113_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1210 | 67 aa hypothetical protein | |||
| ??? | R | XfasSLORF1215P (100% identity) | Xfa8083ORF1235P | |
| ??? | S | S.XfasSLORF1215P (100% identity) | S.Xfa8083ORF1235P | |
| ??? | M | M.XfaWM11ORF1245P (100% identity) | M.Xfa8083ORF1235P | |
| 1255 | 57 aa hypothetical protein | |||
| 10910 | 62 aa hypothetical protein | |||
| 10915 | R | Xfav13ORF11050P (100% identity) | Xfa8083ORF10925P | |
| 10920 | S | S.XfasSLORF11075P (100% identity) | S.Xfa8083ORF10925P | |
| 10925 | M | M.XfasSLORF11075P (100% identity) | M.Xfa8083ORF10925P | |
| 10930 | HNH endonuclease family protein | |||
| 10930 | HNH endonuclease family protein | |||
| 10935 | R | XfasSLORF11100P (100% identity) | GATCNNNNNNNTGC | Xfa8083ORF10950P |
| 10940 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.Xfa8083ORF10950P |
| 10945 | 87 aa hypothetical protein | |||
| 10950 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.Xfa8083ORF10950P |
| 10955 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2995 | ATP-binding protein | |||
| ??? | M | M.XfasSLORF3075P (100% identity) | M.Xfa8083ORF3000P | |
| 3005 | R | XfasSLORF3075P (100% identity) | R1.Xfa8083ORF3000P | |
| 3010 | 53 aa hypothetical protein | |||
| 3015 | R | R2.XfaWM11ORF3020P (100% identity) | R2.Xfa8083ORF3000P | |
| 3020 | uroporphyrinogen decarboxylase | |||
| 6980 | 60 aa hypothetical protein | |||
| 6985 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa8083ORF6985P | |
| 6990 | 51 aa hypothetical protein | |||
| 7055 | low molecular weight phosphotyrosine protein | |||
| 7060 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa8083ORF7060P | |
| 7065 | type II toxin-antitoxin system RelE/ParE family | |||
| 8460 | 41 aa hypothetical protein | |||
| 8465 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfa8083ORF8465P |
| 8470 | R | Xfav13ORF8585P (100% identity) | TTCGAA | Xfa8083ORF8465P |
| 8480 | type IV pilin protein | |||
| 8665 | DNA primase | |||
| ??? | R | Xfav13ORF8800P (100% identity) | Xfa8083ORF8675P | |
| ??? | M | M.Xfav13ORF8800P (100% identity) | M.Xfa8083ORF8675P | |
| 8685 | tryptophan--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4350 | 3-oxoacyl-ACP synthase III | |||
| 4355 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa8083ORF4355P | |
| 4360 | R | XfaWM11ORF4380P (100% identity) | Xfa8083ORF4355P | |
| 4365 | alpha/beta fold hydrolase | |||