Xylella fastidiosa subsp. fastidiosa R2XF4358/18 |
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Putative Xylella fastidiosa subsp. fastidiosa R2XF4358/18 RM systems
Ref: Velasco-Amo,M.D.P. et al. Phytopathology (2022) In press
REBASE ref # 36083
Complete sequence: 2,556,791 bp
GenBank #: CP109898
REBASE acronym: Xfa5818
Org_num: 64694
All begin OK115_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5505 | 62 aa hypothetical protein | |||
| 5510 | R | Xfav13ORF11050P (100% identity) | GATCNNNNNNNTGC | Xfa5818ORF5520P |
| 5515 | S | S.Xfav13ORF11050P (100% identity) | GATCNNNNNNNTGC | S.Xfa5818ORF5520P |
| 5520 | M | M.Xfav13ORF11050P (100% identity) | GATCNNNNNNNTGC | M.Xfa5818ORF5520P |
| 5525 | HNH endonuclease family protein | |||
| 5525 | HNH endonuclease family protein | |||
| 5530 | R | Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | Xfa5818ORF5545P |
| 5535 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.Xfa5818ORF5545P |
| 5540 | 88 aa hypothetical protein | |||
| 5545 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.Xfa5818ORF5545P |
| 5550 | LysE family translocator | |||
| 7080 | DUF45 domain-containing protein | |||
| ??? | R | Xfav13ORF1230P (100% identity) | Xfa5818ORF7100P | |
| ??? | S | S.XfasSLORF1215P (100% identity) | S.Xfa5818ORF7100P | |
| ??? | M | M.XfaWM11ORF1245P (100% identity) | M.Xfa5818ORF7100P | |
| 7120 | 53 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 50 | 50 aa hypothetical protein | |||
| ??? | M | M.Xfav13ORF5610P (100% identity) | GCATGC | M.Xfa5818ORF55P |
| 65 | Ax21 family protein | |||
| 1555 | 60 aa hypothetical protein | |||
| 1560 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa5818ORF1560P | |
| 1565 | 71 aa hypothetical protein | |||
| 1630 | low molecular weight phosphotyrosine protein | |||
| 1635 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa5818ORF1635P | |
| 1640 | type II toxin-antitoxin system RelE/ParE family | |||
| 3040 | 206 aa hypothetical protein | |||
| 3045 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfa5818ORF3045P |
| 3050 | R | Xfav13ORF8585P (100% identity) | TTCGAA | Xfa5818ORF3045P |
| 3055 | 69 aa hypothetical protein | |||
| 3255 | 56 aa hypothetical protein | |||
| ??? | R | Xfav13ORF8800P (100% identity) | Xfa5818ORF3265P | |
| ??? | M | M.Xfav13ORF8800P (100% identity) | M.Xfa5818ORF3265P | |
| 3275 | tryptophan--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10320 | 3-oxoacyl-ACP synthase III | |||
| 10325 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa5818ORF10325P | |
| 10330 | R | Xfav13ORF4440P (100% identity) | Xfa5818ORF10325P | |
| 10335 | alpha/beta fold hydrolase | |||