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Putative Streptococcus dysgalactiae USDA-20A RM systems
Ref: Shoemaker,C.A. et al. Bull Eur Assoc Fish Pathol 2022 (October), 1-12 (2022)
REBASE ref # 36111
Sequence length: | GenBank #: | |
Chromosome: | 2,375,990 bp | CP116461 |
plasmid unnamed1: | 15,715 bp | CP116462 |
REBASE acronym: Sdy20A
Org_num: 64799
All begin PMN45_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3605 | helix-turn-helix transcriptional regulator | |||
3610 | R | Sdy611ORF692P (100% identity) | Sdy20AORF3645P | |
3615 | TIR domain-containing protein | |||
3620 | DUF6430 domain-containing protein | |||
3625 | S | S3.Sdy20BORF3655P (100% identity) | S3.Sdy20AORF3645P | |
3630 | S | S2.Sdy9715ORF9415P (100% identity) | S2.Sdy20AORF3645P | |
3635 | tyrosine-type recombinase/integrase | |||
3640 | S | S1.Sdy20BORF3655P (100% identity) | S1.Sdy20AORF3645P | |
3645 | M | M2.Sdy9715ORF9415P (100% identity) | M.Sdy20AORF3645P | |
3650 | N-6 DNA methylase | |||
6750 | DNA binding domain-containing protein | |||
6755 | R | Sdy20BORF6780P (100% identity) | Sdy20AORF6770P | |
6760 | AAA family ATPase | |||
6765 | S | S1.Sdy20BORF6780P (65% identity) | S.Sdy20AORF6770P | |
6770 | M | M.SthEPSORFAP (100% identity) | M.Sdy20AORF6770P | |
6775 | transposase | |||
plasmid unnamed1 | ||||
11990 | RepB family plasmid replication initiator | |||
11995 | S | S.Lcrr92185ORFEP (94% identity) | S.Sdy20AORF11995P | |
12000 | R | Sdy20BORF12035P (100% identity) | Sdy20AORF11995P | |
12005 | IS6-like element IS1216 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3505 | DUF4314 domain-containing protein | |||
3510 | M | M.Sdy9715ORF9695P (100% identity) | M.Sdy20AORF3510P | |
3515 | DNA methyltransferase | |||
3510 | DNA (cytosine-5-)-methyltransferase | |||
3515 | M | M.Sdy9715ORF9690P (100% identity) | M.Sdy20AORF3515P | |
3520 | HNH endonuclease signature motif containing | |||
4225 | 99 aa hypothetical protein | |||
4230 | M | M.Sdy444ORF10070P (100% identity) | M.Sdy20AORF4230P | |
4235 | single-stranded DNA-binding protein | |||
4360 | modification methylase Sau96I | |||
4365 | M | M.Sdy444ORF10225P (100% identity) | M.Sdy20AORF4365P | |
4370 | 90 aa hypothetical protein |