Escherichia coli HH97 |
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Putative Escherichia coli HH97 RM systems
Ref: Charron,P. et al. unpublished
REBASE ref # 36049
Complete sequence: 4,899,771 bp
GenBank #: CP116409
REBASE acronym: EcoHH97
Org_num: 64570
All begin PL329_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3090 | cell division protein DamX | |||
| 3095 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoHH97DamP |
| 3100 | ribulose-phosphate 3-epimerase | |||
| 3620 | DUF2556 family protein | |||
| 3625 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoHH97ORF3625P |
| 3630 | DNA-binding transcriptional regulator Fis | |||
| 7145 | PerC family transcriptional regulator | |||
| 7150 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.EcoHH97ORF7150P |
| 7155 | LexA family transcriptional regulator | |||
| 11295 | phosphohydrolase | |||
| 11300 | M | M.SspS13DcmP (99% identity) | CCWGG | M.EcoHH97DcmP |
| 11305 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoHH97DcmP |
| 11310 | drug/metabolite exporter YedA | |||
| 14940 | 39 aa hypothetical protein | |||
| 14955 | M | M.EcoVEF5ORF25230P (92% identity) | M.EcoHH97ORF14955P | |
| 14960 | antitermination protein | |||
| 21800 | McrC family protein | |||
| 21805 | R | EcosEC21ORF19520P (58% identity) | GGTCTC | R1.EcoHH97ORF21815P |
| 21810 | R | EcosEC4ORF20110P (30% identity) | GGTCTC | R2.EcoHH97ORF21815P |
| 21815 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoHH97ORF21815P |
| 21820 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoHH97ORF21815P |
| 21825 | IS3 family transposase | |||
| 22075 | 174 aa hypothetical protein | |||
| 22080 | M | M.Sen5773ORF4471P (97% identity) | RCCGGY | M.EcoHH97ORF22080P |
| 22085 | ATP-binding protein | |||
| 22090 | response regulator receiver domain | |||
| 22095 | R | EcoSCU306ORF19130P (100% identity) | EcoHH97ORF22095P | |
| 22100 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7345 | recombinase family protein | |||
| 7350 | R | EspFAAGmrSDP (100% identity) | EcoHH97GmrSDP | |
| 7355 | DinI-like family protein | |||
| 21790 | glycosyltransferase | |||
| 21795 | R | EcoUTAK5McrBP (98% identity) | EcoHH97McrBP | |
| 21800 | R | Ecows53McrCP (95% identity) | EcoHH97McrCP | |
| 21805 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15770 | NinE family protein | |||
| 15775 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoHH97ORF15775P |
| 15780 | recombination protein NinB | |||