Xanthomonas perforans GEV872 |
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Putative Xanthomonas perforans GEV872 RM systems
Ref: Sharma,A. et al. unpublished
REBASE ref # 36061
| Sequence length: | GenBank #: | |
| Chromosome: | 5,043,378 bp | CP116305 |
| plasmid pGEV872.2: | 56,105 bp | CP116307 |
REBASE acronym: Xpe872
Org_num: 64595
All begin PJW04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5800 | DUF262 domain-containing protein | |||
| 5805 | S | S.Xpe91118ORF6580P (100% identity) | S.Xpe872ORF5810P | |
| 5810 | M | M.XpeLH3ORF10890P (100% identity) | M.Xpe872ORF5810P | |
| 5815 | Fic family protein | |||
| 5820 | R | Xpe1001ORF5060P (100% identity) | Xpe872ORF5810P | |
| 5825 | 88 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5315 | conjugal transfer protein TraD | |||
| 5320 | M | M.XpeLH3ORF11400P (100% identity) | TGATCA | M.Xpe872ORF5320P |
| 5325 | helix-turn-helix transcriptional regulator | |||
| 5330 | R | Xpe1001ORF5555P (100% identity) | TGATCA | Xpe872ORF5320P |
| 5335 | 131 aa hypothetical protein | |||
| 18765 | 544 aa hypothetical protein | |||
| 18770 | M | M.XpeLH3ORF20245P (100% identity) | M.Xpe872ORF18770P | |
| 18780 | phage portal protein | |||
| plasmid pGEV872.2 | ||||
| 22160 | right-handed parallel beta-helix | |||
| 22165 | R | Xpe1001ORF21735P (100% identity) | CCGCGG | Xpe872ORF22170P |
| 22170 | M | M.XpeLH3ORF23860P (100% identity) | CCGCGG | M.Xpe872ORF22170P |
| 22175 | ribbon-helix-helix domain-containing protein | |||