Escherichia coli FAH |
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Putative Escherichia coli FAH RM systems
Ref: Xiang,L. et al. unpublished
REBASE ref # 36027
| Sequence length: | GenBank #: | |
| Chromosome: | 5,061,873 bp | CP116035 |
| plasmid unnamed1: | 82,920 bp | CP116036 |
| plasmid unnamed2: | 82,743 bp | CP116037 |
REBASE acronym: EcoFAH
Org_num: 64526
All begin PGH49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20755 | 322 aa hypothetical protein | |||
| 20760 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | EcoFAHORF20765P |
| 20765 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.EcoFAHORF20765P |
| 20770 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.EcoFAHORF20765P |
| 20775 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1765 | cell division protein DamX | |||
| 1770 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoFAHDamP |
| 1775 | ribulose-phosphate 3-epimerase | |||
| 2365 | DUF2556 family protein | |||
| 2370 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.EcoFAHORF2370P |
| 2375 | DNA-binding transcriptional regulator Fis | |||
| 9380 | phosphohydrolase | |||
| 9385 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoFAHDcmP |
| 9390 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoFAHDcmP |
| 9395 | drug/metabolite exporter YedA | |||
| 9960 | antiterminator Q family protein | |||
| 9965 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoFAHORF9965P |
| 9970 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcoFAHORF9965P |
| 9975 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R2.EcoFAHORF9965P |
| 9980 | TrmB family transcriptional regulator | |||
| 9980 | TrmB family transcriptional regulator | |||
| 9985 | M | M.EcoUS12ORF13970P (100% identity) | A | M.EcoFAHORF9985P |
| 10005 | 50 aa hypothetical protein | |||
| 12870 | DUF6378 domain-containing protein | |||
| 12875 | M | M.PmeBin330ORFAP (100% identity) | M.EcoFAHORF12875P | |
| 12880 | 77 aa hypothetical protein | |||
| 13630 | tellurite resistance protein | |||
| 13650 | M | M.SflC32ORFBP (100% identity) | M.EcoFAHORF13650P | |
| 13655 | TrmB family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 25125 | 73 aa hypothetical protein | |||
| 25130 | M | M.Sso2ORF26005P (100% identity) | M.EcoFAHORF25130P | |
| 25135 | 103 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25785 | 103 aa hypothetical protein | |||
| 25790 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoFAHORF25790P |
| 25795 | 73 aa hypothetical protein | |||