Escherichia coli DETEC-P169 |
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Putative Escherichia coli DETEC-P169 RM systems
Ref: Moran,R.A. et al. unpublished
REBASE ref # 36014
| Sequence length: | GenBank #: | |
| Chromosome: | 4,745,470 bp | CP116166 |
| plasmid pDETEC1: | 119,948 bp | CP116167 |
| plasmid pDETEC2: | 113,066 bp | CP116168 |
REBASE acronym: EcoP169
Org_num: 64508
All begin PID12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5705 | IS1 family transposase | |||
| 5710 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoP169ORF5720P |
| 5715 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoP169ORF5720P |
| 5720 | M | M.SenS688ORF13495P (66% identity) | ACAYNNNNCTG | M.EcoP169ORF5720BP |
| 5725 | IS3-like element IS3 family transposase | |||
| 5730 | M | M.SenS688ORF13495P (34% identity) | ACAYNNNNCTG | M.EcoP169ORF5720AP |
| 5735 | integrase core domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoP169DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2445 | DUF2556 family protein | |||
| 2450 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoP169ORF2450P |
| 2455 | DNA-binding transcriptional regulator Fis | |||
| 7950 | PerC family transcriptional regulator | |||
| 7955 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoP169ORF7955P |
| 7960 | LexA family transcriptional regulator | |||
| 7985 | 67 aa hypothetical protein | |||
| 7990 | M | M.Sso63633ORF22290P (99% identity) | M.EcoP169ORF7990P | |
| 7995 | phage lysis protein EssD | |||
| 9165 | phosphohydrolase | |||
| 9170 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoP169DcmP |
| 9175 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoP169DcmP |
| 9180 | drug/metabolite exporter YedA | |||
| 19490 | phage lysis protein EssD | |||
| 19495 | M | M.SflN116ORF17735P (100% identity) | M.EcoP169ORF19495P | |
| 19500 | 67 aa hypothetical protein | |||
| 19530 | LexA family transcriptional regulator | |||
| 19535 | M | M.SflN101ORF11410P (100% identity) | GATC | M.EcoP169ORF19535P |
| 19540 | PerC family transcriptional regulator | |||
| plasmid pDETEC1 | ||||
| 23635 | recombination-associated protein RdgC | |||
| 23640 | M | M.EcoST361ORF24505P (100% identity) | M.EcoP169ORF23640P | |
| 23655 | tellurite/colicin resistance protein | |||
| plasmid pDETEC2 | ||||
| 24315 | 73 aa hypothetical protein | |||
| 24320 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoP169ORF24320P | |
| 24325 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pDETEC1 | ||||
| 23370 | maturation control protein | |||
| 23375 | R | EcoST361ORF24765P (100% identity) | CAGCAG | EcoP169ORF23380P |
| 23380 | M | M.EcoST361ORF24765P (100% identity) | CAGCAG | M.EcoP169ORF23380P |
| 23385 | modulator protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14960 | replication endonuclease | |||
| 14965 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoP169ORF14965P |
| 14970 | TraR/DksA family transcriptional regulator | |||