Escherichia coli DETEC-S560 |
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Putative Escherichia coli DETEC-S560 RM systems
Ref: Moran,R.A. et al. unpublished
REBASE ref # 36014
| Sequence length: | GenBank #: | |
| Chromosome: | 4,942,224 bp | CP116094 |
| plasmid pDETEC69: | 86,167 bp | CP116096 |
REBASE acronym: EcoS560
Org_num: 64519
All begin PIC78_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10 | replication endonuclease | |||
| 15 | M | M.SflFF38ORF15P (100% identity) | GGCC | M.EcoS560ORF15P |
| 20 | 330 aa hypothetical protein | |||
| 4125 | tyrosine-type recombinase/integrase | |||
| 4130 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.EcoS560ORF4130P |
| 4135 | zinc ribbon domain-containing protein | |||
| 5735 | TrmB family transcriptional regulator | |||
| 5740 | M | M.EcoWW2ORF16975P (100% identity) | M.EcoS560ORF5740P | |
| 5745 | class II holin family protein | |||
| 13325 | drug/metabolite exporter YedA | |||
| 13330 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoS560DcmP |
| 13335 | M | M.SflN92DcmP (100% identity) | CCWGG | M.EcoS560DcmP |
| 13340 | phosphohydrolase | |||
| 18740 | IS3 family transposase | |||
| 18745 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoS560ORF18750P |
| 18750 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.EcoS560ORF18750P |
| 18755 | integrase | |||
| 20520 | DNA-binding transcriptional regulator Fis | |||
| 20525 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoS560ORF20525P |
| 20530 | 26 aa hypothetical protein | |||
| 21145 | ribulose-phosphate 3-epimerase | |||
| 21150 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoS560DamP |
| 21155 | cell division protein DamX | |||
| plasmid pDETEC69 | ||||
| 24665 | 103 aa hypothetical protein | |||
| 24670 | M | M.Ssp14523ORF22990P (100% identity) | M.EcoS560ORF24670P | |
| 24675 | 73 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7510 | TraR/DksA family transcriptional regulator | |||
| 7515 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoS560ORF7515P |
| 7520 | replication endonuclease | |||