Escherichia coli DETEC-C31 |
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Putative Escherichia coli DETEC-C31 RM systems
Ref: Moran,R.A. et al. unpublished
REBASE ref # 36014
| Sequence length: | GenBank #: | |
| Chromosome: | 4,897,706 bp | CP116197 |
| plasmid pDETEC87: | 113,249 bp | CP116198 |
| plasmid pDETEC89: | 86,715 bp | CP116200 |
REBASE acronym: EcoCC31
Org_num: 64478
All begin PIB97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20170 | 184 aa hypothetical protein | |||
| 20175 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | EcoCC31ORF20185P |
| 20180 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoCC31ORF20185P |
| 20185 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoCC31ORF20185P |
| 20190 | type II toxin-antitoxin system RelB/DinJ family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1860 | cell division protein DamX | |||
| 1865 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCC31DamP |
| 1870 | ribulose-phosphate 3-epimerase | |||
| 2415 | DUF2556 family protein | |||
| 2420 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoCC31ORF2420P |
| 2425 | DNA-binding transcriptional regulator Fis | |||
| 4470 | helix-turn-helix transcriptional regulator | |||
| 4475 | R | EcoXH990ORF7415P (99% identity) | EcoCC31ORF4475P | |
| 4480 | glycoside hydrolase family 15 protein | |||
| 5615 | adhesin-like autotransporter YpjA/EhaD | |||
| 5620 | R | Sens24184ORF5380P (100% identity) | C | EcoCC31ORF5620P |
| 5625 | primase-like DNA-binding domain-containing | |||
| 5645 | integrase domain-containing protein | |||
| 5650 | M | M.Ecoi64ORF2425P (100% identity) | M.EcoCC31ORF5650P | |
| 5655 | AAA family ATPase | |||
| 5730 | PerC family transcriptional regulator | |||
| 5735 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoCC31ORF5735P |
| 5740 | LexA family transcriptional regulator | |||
| 5770 | 67 aa hypothetical protein | |||
| 5775 | M | M.Sso63633ORF22290P (100% identity) | M.EcoCC31ORF5775P | |
| 5780 | phage lysis protein EssD | |||
| 9210 | phosphohydrolase | |||
| 9215 | M | M.EcoR5DcmP (100% identity) | CCWGG | M.EcoCC31DcmP |
| 9220 | V | V.EcoLR291DcmP (100% identity) | V.EcoCC31DcmP | |
| 9225 | drug/metabolite exporter YedA | |||
| 17790 | LexA family transcriptional regulator | |||
| 17795 | M | M.EcoH22ORF14600P (100% identity) | GATC | M.EcoCC31ORF17795P |
| 17800 | PerC family transcriptional regulator | |||
| 19955 | HNH endonuclease | |||
| 19960 | R | EcoW619ORFAP (96% identity) | EcoCC31ORF19960P | |
| 19965 | 100 aa hypothetical protein | |||
| plasmid pDETEC89 | ||||
| 24715 | 103 aa hypothetical protein | |||
| 24720 | M | M.Ssp14523ORF22990P (100% identity) | M.EcoCC31ORF24720P | |
| 24725 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19965 | 100 aa hypothetical protein | |||
| 19970 | R | Ecos19ORF20250P (100% identity) | EcoCC31ORF19975P | |
| 19975 | M | M.EcoXH990ORF24545P (100% identity) | M.EcoCC31ORF19975P | |
| 19980 | SNF2-related protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pDETEC87 | ||||
| 23865 | 76 aa hypothetical protein | |||
| 23870 | M | M.Sso524ORF460P (100% identity) | GATC | M.EcoCC31ORF23870P |
| 23875 | 269 aa hypothetical protein | |||