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Putative Ruminococcus species FMB-CY1 RM systems
Ref: Hong,Y.S. et al. Food Sci Biotechnol 31 (2), 231-241 (2022)
REBASE ref # 36031
Complete sequence: 2,375,995 bp
GenBank #: CP084034
REBASE acronym: RspCY1
Org_num: 64534
All begin LCN94_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1660 | DUF262 domain-containing HNH endonuclease family | |||
1665 | S | S.RspFMBCY1ORF6635P (100% identity) | S.RspCY1ORF1670P | |
1670 | M | M.RspFMBCY1ORF6635P (100% identity) | M.RspCY1ORF1670P | |
1675 | R | RspFMBCY1ORF6635P (100% identity) | RspCY1ORF1670P | |
1680 | replication initiator protein A | |||
5075 | SLATT domain-containing protein | |||
5080 | R | RspFMBCY1ORF3210P (100% identity) | RspCY1ORF5090P | |
5085 | S | S.RspFMBCY1ORF3210P (100% identity) | S.RspCY1ORF5090P | |
5090 | M | M.RspFMBCY1ORF3210P (100% identity) | M.RspCY1ORF5090P | |
5095 | helix-turn-helix transcriptional regulator | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
5830 | 107 aa hypothetical protein | |||
5835 | M | M.RspFMBCY1ORF2465P (98% identity) | M.RspCY1ORF5835P | |
5840 | 257 aa hypothetical protein | |||
5870 | amidoligase family protein | |||
5875 | M | M.PmeBin244ORFDP (100% identity) | M.RspCY1ORF5875P | |
5880 | 190 aa hypothetical protein | |||
8405 | 72 aa hypothetical protein | |||
8410 | M | M2.RspFMBCY1ORF11575P (97% identity) | M1.RspCY1ORF8410P | |
8415 | M | M1.RspFMBCY1ORF11575P (96% identity) | M2.RspCY1ORF8410P | |
8420 | DUF4314 domain-containing protein | |||
9845 | helix-turn-helix transcriptional regulator | |||
9850 | M | M.RspFMBCY1ORF10145P (100% identity) | M.RspCY1ORF9850P | |
9855 | holin | |||
11065 | alpha-glucosidase | |||
11070 | R | RspFMBCY1ORF8920P (100% identity) | RspCY1ORF11075P | |
11075 | M | M.RspFMBCY1ORF8920P (100% identity) | M.RspCY1ORF11075P | |
11080 | helix-turn-helix transcriptional regulator | |||
11120 | xanthine phosphoribosyltransferase | |||
11125 | M | M.RspFMBCY1ORF8870P (100% identity) | M.RspCY1ORF11125P | |
11130 | R | RspFMBCY1ORF8870P (100% identity) | RspCY1ORF11125P | |
11135 | helix-turn-helix domain-containing protein | |||
11140 | 220 aa hypothetical protein | |||
11145 | R | RspFMBCY1ORF8845P (100% identity) | RspCY1ORF11150P | |
11150 | M | M.RspFMBCY1ORF8845P (100% identity) | M.RspCY1ORF11150P | |
11155 | Eco57I restriction-modification methylase | |||
11150 | class I SAM-dependent methyltransferase | |||
11155 | RM | RspFMBCY1ORF8840P (100% identity) | RspCY1ORF11155P | |
11160 | TnpV protein | |||
11430 | transporter substrate-binding domain-containing | |||
11435 | M | M2.RspFMBCY1ORF8550P (100% identity) | M1.RspCY1ORF11435P | |
11440 | R | RspFMBCY1ORF8550P (100% identity) | RspCY1ORF11435P | |
11445 | M | M1.RspFMBCY1ORF8550P (100% identity) | M2.RspCY1ORF11435P | |
11450 | DUF3783 domain-containing protein |