Neisseria gonorrhoeae FA1090 N-1-60 |
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Putative Neisseria gonorrhoeae FA1090 N-1-60 RM systems
Ref: Hu,L.I. et al. mBio 11 (5), e02528-20 (2020)
REBASE ref # 35985
Complete sequence: 2,155,007 bp
GenBank #: CP115654
REBASE acronym: NgoN160
Org_num: 64360
All begin OK783_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2070 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2075 | M | M.Ngos1291ORF7750P (100% identity) | M.NgoN160ORF2075P | |
| 2080 | DNA damage-inducible protein D | |||
| 2085 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.NgoN160ORF2075P |
| 2090 | S | S2.NgoAT159ORF7305P (100% identity) | GCANNNNNNNNTGC | S2.NgoN160ORF2075P |
| 2095 | R | NgoAV-1 (100% identity) | NgoN160ORF2075P | |
| 2100 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3585 | replication-associated recombination protein A | |||
| 3590 | R | NgoAXVIIP (99% identity) | GAGNNNNNTAC | NgoN160ORF3615P |
| 3595 | hydroxyacid dehydrogenase | |||
| 3600 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoN160ORF3615P |
| 3605 | 186 aa hypothetical protein | |||
| 3610 | 280 aa hypothetical protein | |||
| 3615 | M | M.Ngos1291I (100% identity) | GAGNNNNNTAC | M.NgoN160ORF3615P |
| 3620 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | NgoSW0274ORF40P (100% identity) | GATC | NgoN160ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | restriction endonuclease | |||
| 40 | M | M.NgoAXIP (93% identity) | M.NgoN160ORF40P | |
| 45 | 184 aa hypothetical protein | |||
| 1540 | phenylalanine--tRNA ligase subunit alpha | |||
| 1545 | V | V.NgoWSORF391P (100% identity) | V.NgoN160ORF1550P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.NgoN160ORF1550P |
| 1560 | R | NgoWSORF391P (100% identity) | CCGG | NgoN160ORF1550P |
| 1565 | phenylalanine--tRNA ligase subunit beta | |||
| 1835 | IS1595 family transposase | |||
| 1840 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoN160ORF1840P |
| 1845 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.NgoN160ORF1840P |
| 1850 | protein Gly1ORF1 | |||
| 1870 | uroporphyrinogen decarboxylase | |||
| 1875 | H | H.NgoHL122ORF1875P (100% identity) | H.NgoN160ORF1885P | |
| 1880 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoN160ORF1885P |
| 1885 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoN160ORF1885P |
| 1890 | DNA repair protein RadA | |||
| 3470 | 3-isopropylmalate dehydrogenase | |||
| 3475 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoN160ORF3480P |
| 3480 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoN160ORF3480P |
| 3485 | 3-isopropylmalate dehydratase small subunit | |||
| 4450 | anthranilate synthase component I | |||
| 4455 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoN160ORF4455P |
| 4460 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoN160ORF4455P |
| 4465 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5895 | replication initiation factor domain-containing | |||
| 5900 | V | V.Ngos1291ORF65P (100% identity) | V.NgoN160ORF5915P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | NgoN160ORF5915P |
| ??? | M | M.NgoAXIVP (100% identity) | CCGG | M.NgoN160ORF5915P |
| 5925 | type IV pilin protein | |||
| 6105 | excinuclease ABC subunit UvrA | |||
| 6110 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoN160ORF6115P |
| 6115 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoN160ORF6115P |
| 6120 | 62 aa hypothetical protein | |||
| 9170 | FUSC family protein | |||
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | NgoN160ORF9185P |
| 9185 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoN160ORF9185P |
| 9190 | ribosome recycling factor | |||
| 10270 | GTPase ObgE | |||
| 10275 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.NgoN160ORF10275P |
| 10280 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoN160ORF10275P |
| 10285 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2805 | peptidylprolyl isomerase | |||
| 2810 | M | M.NgoSW0032ORF2780P (100% identity) | CCACC | M.NgoN160ORF2810P |
| 2815 | R | Ngos1291ORF8455P (99% identity) | CCACC | NgoN160ORF2810P |
| 2820 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3275 | alpha-hydroxy acid oxidase | |||
| 3280 | R | NgoSH240ORFJP (100% identity) | NgoN160ORF3285P | |
| 3285 | M | M.NgoWGORF1092P (68% identity) | M.NgoN160ORF3285BP | |
| 3290 | M | M.NgoSW0015ORF3255P (24% identity) | M.NgoN160ORF3285AP | |
| 3295 | tRNA pseudouridine(55) synthase TruB | |||