Escherichia coli PV0838 |
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Putative Escherichia coli PV0838 RM systems
Ref: Yano,B. et al. unpublished
REBASE ref # 35969
| Sequence length: | GenBank #: | |
| Chromosome: | 5,770,126 bp | AP027188 |
| plasmid pO26_PV0838_1: | 70,980 bp | AP027189 |
REBASE acronym: Eco838
Org_num: 64316
All begin PV0838_, PV0838_p1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5624 | toxic peptide regulated by antisense sRNA symR | |||
| 5625 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.Eco838ORF5626P |
| 5626 | M | M.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | M.Eco838ORF5626P |
| 5627 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | Eco838ORF5626P |
| 5628 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1624 | recombination protein | |||
| ??? | M | M.EcoX21ORFCP (100% identity) | GATC | M.Eco838ORF1625P |
| 1626 | phage antirepressor protein | |||
| 1847 | 65 aa hypothetical protein | |||
| 1848 | M | M.EcoZ1836ORF11435P (100% identity) | M.Eco838ORF1848P | |
| 1849 | Shiga toxin 2 subunit A | |||
| 2897 | amino acid exporter for phenylalanine | |||
| 2898 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco838DcmP |
| 2899 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco838DcmP |
| 2900 | 142 aa hypothetical protein | |||
| 3246 | 611 aa hypothetical protein | |||
| ??? | M | M.EcoSTEC416ORF20240P (100% identity) | GATC | M.Eco838ORF3247P |
| 3248 | recombination protein | |||
| 3757 | repressor | |||
| 3758 | M | M.EcoSTEC411ORF14855P (100% identity) | GATC | M.Eco838ORF3758P |
| 3759 | 162 aa hypothetical protein | |||
| 4434 | global DNA-binding transcriptional dual | |||
| 4435 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco838ORF4435P |
| 4436 | 59 aa hypothetical protein | |||
| 4543 | D-ribulose-5-phosphate 3-epimerase | |||
| 4544 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco838DamP |
| 4545 | cell division protein DamX | |||
| plasmid pO26_PV0838_1 | ||||
| 52 | 73 aa hypothetical protein | |||
| 53 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco838ORF53P |
| 54 | 308 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5622 | 54 aa hypothetical protein | |||
| 5623 | R | EcoSTEC508GmrSDP (100% identity) | Eco838GmrSDP | |
| 5624 | toxic peptide regulated by antisense sRNA symR | |||