Escherichia coli EC_E9BF_1_E_CuN_CeN |
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Putative Escherichia coli EC_E9BF_1_E_CuN_CeN RM systems
Ref: Sanderson,H. et al. unpublished
REBASE ref # 35970
Complete sequence: 5,258,390 bp
GenBank #: CP115173
REBASE acronym: EcoCeN
Org_num: 64311
All begin PB007_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4265 | IS66 family transposase | |||
| 4270 | R | EmaC12ORF18910P (99% identity) | GAACNNNNNTGC | EcoCeNORF4275P |
| 4275 | M | M.Sen6640ORF2690P (100% identity) | GAACNNNNNTGC | M.EcoCeNORF4275P |
| 4280 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.EcoCeNORF4275P |
| 4285 | transposase domain-containing protein | |||
| 6090 | 58 aa hypothetical protein | |||
| 6095 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.EcoCeNORF6095P |
| 6100 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.EcoCeNORF6095P |
| 6105 | DUF4433 domain-containing protein | |||
| 6110 | macro domain-containing protein | |||
| 6115 | R | Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | EcoCeNORF6095P |
| 6120 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1720 | cell division protein DamX | |||
| 1725 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCeNDamP |
| 1730 | ribulose-phosphate 3-epimerase | |||
| 2345 | DUF2556 family protein | |||
| 2350 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoCeNORF2350P |
| 2355 | DNA-binding transcriptional regulator Fis | |||
| 6290 | TraR/DksA family transcriptional regulator | |||
| 6295 | M | M.SflLIN17ORF14475P (100% identity) | GATC | M.EcoCeNORF6295P |
| 6300 | replication endonuclease | |||
| 10355 | phosphohydrolase | |||
| 10360 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoCeNDcmP |
| 10365 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoCeNDcmP |
| 10370 | drug/metabolite exporter YedA | |||
| 13385 | DUF977 family protein | |||
| 13390 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoCeNORF13390P | |
| 13395 | 139 aa hypothetical protein | |||
| 15120 | holin | |||
| 15145 | M | M.Eco40C22ORF14420P (100% identity) | M.EcoCeNORF15145P | |
| 15150 | TrmB family transcriptional regulator | |||
| 20525 | LexA family transcriptional regulator | |||
| 20530 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoCeNORF20530P |
| 20535 | PerC family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15855 | isocitrate/isopropylmalate family dehydrogenase | |||
| 15860 | R | EcoRS76GmrSDP (100% identity) | EcoCeNGmrSDP | |
| 15865 | recombinase family protein | |||
| 22525 | GTPase | |||
| 22530 | R | Ssp28760MrrP (100% identity) | EcoCeNMrrP | |
| 22535 | type I restriction-modification system | |||