Escherichia coli NJS001 |
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Putative Escherichia coli NJS001 RM systems
Ref: Ma,J. unpublished
REBASE ref # 27651
| Sequence length: | GenBank #: | |
| Chromosome: | 5,106,685 bp | CP114130 |
| plasmid pNJS001-2: | 438,722 bp | CP114132 |
| plasmid pNJS001-3: | 92,752 bp | CP114133 |
REBASE acronym: EcoNJS001
Org_num: 63733
All begin N0F11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21855 | DUF262 domain-containing protein | |||
| 21860 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoNJS001ORF21865P |
| 21865 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoNJS001ORF21865P |
| 21870 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoNJS001ORF21865P |
| 21875 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2080 | cell division protein DamX | |||
| 2085 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoNJS001DamP |
| 2090 | ribulose-phosphate 3-epimerase | |||
| 2595 | DUF2556 family protein | |||
| 2600 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoNJS001ORF2600P |
| 2605 | DNA-binding transcriptional regulator Fis | |||
| 10200 | TrmB family transcriptional regulator | |||
| 10205 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoNJS001ORF10205P | |
| 10220 | IS3-like element IS1203 family transposase | |||
| 20080 | phage holin, lambda family | |||
| 20085 | M | M.Sso1099ORF23565P (100% identity) | M.EcoNJS001ORF20085P | |
| 20090 | 95 aa hypothetical protein | |||
| 20125 | LexA family transcriptional regulator | |||
| 20130 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoNJS001ORF20130P |
| 20135 | PerC family transcriptional regulator | |||
| 22090 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoNJS001ORF22090P |
| 22095 | DEAD/DEAH box helicase | |||
| 22125 | N-acetylneuraminic acid mutarotase | |||
| 22130 | R | Ecos1613ORF26795P (100% identity) | EcoNJS001ORF22130P | |
| 22135 | transposase | |||
| 23360 | Eae protein | |||
| 23365 | M | M.EcosPA8ORF16100P (100% identity) | M.EcoNJS001ORF23365P | |
| 23370 | 65 aa hypothetical protein | |||
| plasmid pNJS001-2 | ||||
| 27735 | phosphohydrolase | |||
| 27740 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoNJS001DcmP |
| 27745 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.EcoNJS001DcmP |
| 27750 | drug/metabolite exporter YedA | |||
| plasmid pNJS001-3 | ||||
| 28685 | 73 aa hypothetical protein | |||
| 28690 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoNJS001ORF28690P | |
| 28695 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21875 | endoribonuclease SymE | |||
| 21880 | R | EcosPA8GmrSDP (55% identity) | EcoNJS001GmrDP | |
| 21885 | R | Ecos1613GmrSP (100% identity) | EcoNJS001GmrSP | |
| 21890 | cytoplasmic protein | |||