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Putative Pandoraea species XJJ-1 RM systems
Ref: Yuan,B. and Zhang,L. unpublished
REBASE ref # 35809
Complete sequence: 5,378,876 bp
GenBank #: CP113827
REBASE acronym: PspXJJ1
Org_num: 63850
All begin OYT13_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
18700 | transposase | |||
??? | S | S1.XorCHN01ORF2975P (36% identity) | S2.PspXJJ1ORF18730P | |
18710 | 3-5 exonuclease | |||
18715 | PD-(D/E)XK nuclease family protein | |||
18720 | DUF3293 domain-containing protein | |||
18725 | endonuclease NucS | |||
18730 | M | M.PspBNSORF13025P (93% identity) | M.PspXJJ1ORF18730P | |
18735 | S | S.AcaCH129ORF11330P (42% identity) | S1.PspXJJ1ORF18730P | |
18740 | restriction endonuclease | |||
18745 | R | PspBNSORF13025P (92% identity) | PspXJJ1ORF18730P | |
18750 | HNH endonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
8740 | tryptophan synthase subunit beta | |||
8745 | M | M.PspNE5ORF41730P (93% identity) | GTWWAC | M.PspXJJ1ORF8745P |
8750 | tryptophan synthase subunit alpha | |||
15990 | 120 aa hypothetical protein | |||
15995 | M | M.Csp24ORF35870P (82% identity) | M.PspXJJ1ORF15995P | |
16000 | DUF4224 domain-containing protein | |||
16755 | 171 aa hypothetical protein | |||
16760 | M | M.PspNE5ORF29640P (90% identity) | M.PspXJJ1ORF16760P | |
16765 | type II toxin-antitoxin system HicA family | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
20345 | ATP-binding protein | |||
20350 | R | PchT1624SspCP (100% identity) | PspXJJ1ORF20355P | |
20355 | M | M.SspCW117ORF8175P (100% identity) | M.PspXJJ1ORF20355P | |
20360 | AIPR family protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
7595 | phosphatase PAP2 family protein | |||
7600 | R | Psp92MrrP (80% identity) | PspXJJ1MrrP | |
7605 | FMN-binding negative transcriptional regulator |