Yersinia ruckeri NVI-11050 |
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Putative Yersinia ruckeri NVI-11050 RM systems
Ref: Riborg,A. et al. J Fish Dis 45 (5), 641-653 (2022)
REBASE ref # 35836
Complete sequence: 3,853,871 bp
GenBank #: CP099815
REBASE acronym: Yru11050
Org_num: 63900
All begin LNQ40_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 735 | SPOR domain-containing protein | |||
| 740 | M | M.YruSC09DamP (100% identity) | GATC | M.Yru11050DamP |
| 745 | ribulose-phosphate 3-epimerase | |||
| 4860 | 76 aa hypothetical protein | |||
| 4865 | M | M.Yru440ORF2475P (100% identity) | GATC | M.Yru11050ORF4865P |
| 4870 | 91 aa hypothetical protein | |||
| 10290 | DUF2732 domain-containing protein | |||
| 10295 | M | M.Yru82ORF10630P (100% identity) | GATC | M.Yru11050ORF10295P |
| 10300 | replication endonuclease | |||
| 11275 | DUF1367 family protein | |||
| 11280 | M | M1.Yru8524ORF9620P (22% identity) | M.Yru11050ORF11280P | |
| 11285 | 54 aa hypothetical protein | |||
| 11900 | RusA family crossover junction | |||
| 11905 | M | M.Yru701ORF11090P (99% identity) | M.Yru11050ORF11905P | |
| 11910 | helix-turn-helix domain-containing protein | |||
| 11975 | 210 aa hypothetical protein | |||
| 11980 | M | M.Yru9681ORF11115P (99% identity) | M.Yru11050ORF11980P | |
| 11985 | 3-5 exoribonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2065 | STY4851/ECs_5259 family protein | |||
| 2070 | R | Yru440McrCP (86% identity) | Yru11050McrCP | |
| 2075 | IS3 family transposase | |||