Escherichia coli GN03344 |
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Putative Escherichia coli GN03344 RM systems
Ref: Bethke,J.H. et al. unpublished
REBASE ref # 35779
| Sequence length: | GenBank #: | |
| Chromosome: | 4,966,856 bp | CP095544 |
| plasmid p3344-5: | 131,082 bp | CP095547 |
REBASE acronym: Eco3344
Org_num: 63726
All begin MW402_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12960 | type IV toxin-antitoxin system AbiEi family | |||
| 12965 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco3344ORF12970P |
| 12970 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco3344ORF12970P |
| 12975 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco3344ORF12970P |
| 12980 | ash family protein | |||
| 14780 | restriction endonuclease | |||
| 14785 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco3344ORF14785P |
| 14790 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco3344ORF14785P |
| 14795 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco3344ORF14785P |
| 14800 | endoribonuclease SymE | |||
| plasmid p3344-5 | ||||
| 25440 | IS1-like element IS1A family transposase | |||
| 25445 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | Eco3344ORF25455P |
| 25450 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.Eco3344ORF25455P |
| 25455 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.Eco3344ORF25455P |
| 25460 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3645 | phosphohydrolase | |||
| 3650 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco3344DcmP |
| 3655 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco3344DcmP |
| 3660 | drug/metabolite exporter YedA | |||
| 7190 | DUF3927 family protein | |||
| 7205 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco3344ORF7205P |
| 7210 | TrmB family transcriptional regulator | |||
| 9475 | helix-turn-helix domain-containing protein | |||
| 9480 | M | M.KpnYN1ORFGP (89% identity) | M.Eco3344ORF9480P | |
| 9485 | 71 aa hypothetical protein | |||
| 15130 | McrC family protein | |||
| 15135 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco3344ORF15140P |
| 15140 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco3344ORF15140P |
| 15145 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco3344ORF15140P |
| 15150 | helix-turn-helix domain-containing protein | |||
| 20295 | cell division protein DamX | |||
| 20300 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3344DamP |
| 20305 | ribulose-phosphate 3-epimerase | |||
| 20895 | DUF2556 family protein | |||
| 20900 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco3344ORF20900P |
| 20905 | DNA-binding transcriptional regulator Fis | |||
| plasmid p3344-5 | ||||
| 25380 | 73 aa hypothetical protein | |||
| 25385 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco3344ORF25385P |
| 25390 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14775 | BrnT family toxin | |||
| 14780 | R | Ecou021MrrP (100% identity) | Eco3344MrrP | |
| 14785 | type I restriction-modification system subunit | |||
| 15120 | glycosyltransferase | |||
| 15125 | R | EcosS3McrBP (100% identity) | Eco3344McrBP | |
| 15130 | R | EcosS9McrCP (100% identity) | Eco3344McrCP | |
| 15135 | Alw26I/Eco31I/Esp3I family type II restriction | |||