Escherichia coli GN04592 |
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Putative Escherichia coli GN04592 RM systems
Ref: Bethke,J.H. et al. unpublished
REBASE ref # 35779
| Sequence length: | GenBank #: | |
| Chromosome: | 5,233,040 bp | CP095538 |
| plasmid p4592: | 135,067 bp | CP095539 |
REBASE acronym: Eco4592
Org_num: 63728
All begin MW396_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20130 | adenine/cytosine-specific restriction | |||
| 20135 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco4592ORF20140P |
| 20140 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco4592ORF20140P |
| 20145 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco4592ORF20140P |
| 20150 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 790 | DUF2556 family protein | |||
| 795 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco4592ORF795P |
| 800 | DNA-binding transcriptional regulator Fis | |||
| 8090 | phosphohydrolase | |||
| 8095 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco4592DcmP |
| 8100 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco4592DcmP |
| 8105 | drug/metabolite exporter YedA | |||
| 11530 | DUF6378 domain-containing protein | |||
| 11535 | M | M.EcoR51ORF13805P (96% identity) | M.Eco4592ORF11535P | |
| 11540 | 77 aa hypothetical protein | |||
| 12240 | 39 aa hypothetical protein | |||
| 12260 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco4592ORF12260P |
| 12265 | TrmB family transcriptional regulator | |||
| 13175 | NinE family protein | |||
| 13180 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco4592ORF13180P |
| 13185 | recombination protein NinB | |||
| 22710 | phage portal protein | |||
| 22715 | R | R2.Eco4WUORFEP (99% identity) | R1.Eco4592ORF22725P | |
| 22720 | R | R1.Eco4WUORFEP (99% identity) | R2.Eco4592ORF22725P | |
| 22725 | M | M.Eco4WUORFEP (99% identity) | M.Eco4592ORF22725P | |
| 22730 | 70 aa hypothetical protein | |||
| plasmid p4592 | ||||
| 25535 | 73 aa hypothetical protein | |||
| 25540 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco4592ORF25540P |
| 25545 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20125 | GTPase | |||
| 20130 | R | Ssp28760MrrP (100% identity) | Eco4592MrrP | |
| 20135 | type I restriction-modification system | |||
| 20150 | endoribonuclease SymE | |||
| 20155 | R | SenHNK130McrBP (100% identity) | Eco4592McrBP | |
| 20160 | R | SenHNK130McrCP (100% identity) | Eco4592McrCP | |