Escherichia coli GN06156 |
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Putative Escherichia coli GN06156 RM systems
Ref: Bethke,J.H. et al. unpublished
REBASE ref # 35779
| Sequence length: | GenBank #: | |
| Chromosome: | 4,873,837 bp | CP095529 |
| plasmid p6156-1: | 63,283 bp | CP095530 |
| plasmid p6156-2: | 89,276 bp | CP095531 |
REBASE acronym: Eco6156
Org_num: 63730
All begin MW397_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2950 | toll/interleukin-1 receptor domain-containing | |||
| 2955 | M | M1.EcoR47ORF16440P (100% identity) | M1.Eco6156ORF2955P | |
| 2960 | M | M2.EcoR47ORF16440P (100% identity) | M2.Eco6156ORF2955P | |
| 2965 | S | S.EcoR47ORF16440P (100% identity) | S.Eco6156ORF2955P | |
| 2970 | R | EcoR47ORF16440P (100% identity) | Eco6156ORF2955P | |
| 2975 | N-6 DNA methylase | |||
| 3170 | 237 aa hypothetical protein | |||
| 3175 | R | Ecos135ORF4680P (100% identity) | Eco6156ORF3185P | |
| 3180 | S | S.Ecos135ORF4680P (99% identity) | S.Eco6156ORF3185P | |
| 3185 | M | M.Ecos135ORF4680P (100% identity) | M.Eco6156ORF3185P | |
| 3190 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7675 | PerC family transcriptional regulator | |||
| 7680 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco6156ORF7680P |
| 7685 | LexA family transcriptional regulator | |||
| 13755 | drug/metabolite exporter YedA | |||
| 13760 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.Eco6156DcmP |
| 13765 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Eco6156DcmP |
| 13770 | phosphohydrolase | |||
| 14530 | replication endonuclease | |||
| 14535 | M | M.EcoSO40ORF23900P (100% identity) | GATC | M.Eco6156ORF14535P |
| 14540 | 127 aa hypothetical protein | |||
| 20475 | DNA-binding transcriptional regulator Fis | |||
| 20480 | M | M.EcoR47ORF4025P (100% identity) | ATGCAT | M.Eco6156ORF20480P |
| 20485 | DUF2556 family protein | |||
| 21010 | ribulose-phosphate 3-epimerase | |||
| 21015 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco6156DamP |
| 21020 | cell division protein DamX | |||
| plasmid p6156-1 | ||||
| 23565 | 96 aa hypothetical protein | |||
| 23570 | M | M.EcoYL3ORF24820P (99% identity) | M.Eco6156ORF23570P | |
| 23575 | 73 aa hypothetical protein | |||
| plasmid p6156-2 | ||||
| 23635 | 73 aa hypothetical protein | |||
| 23640 | M | M.SspZ54ORF25955P (100% identity) | M.Eco6156ORF23640P | |
| 23645 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3185 | type I restriction-modification system subunit | |||
| ??? | R | EcoTHYM1GmrSDP (100% identity) | Eco6156GmrSDP | |
| 3200 | IS3-like element ISEc31 family transposase | |||