Escherichia coli MS1050 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli MS1050 RM systems
Ref: Jia,L. et al. unpublished
REBASE ref # 35727
| Sequence length: | GenBank #: | |
| Chromosome: | 4,988,424 bp | CP097726 |
| plasmid pMS1050-2: | 117,915 bp | CP097728 |
REBASE acronym: EcoMS1050
Org_num: 63558
All begin M9O78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19715 | adenine/cytosine-specific restriction | |||
| 19720 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoMS1050ORF19725P |
| 19725 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoMS1050ORF19725P |
| 19730 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoMS1050ORF19725P |
| 19735 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1900 | cell division protein DamX | |||
| 1905 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoMS1050DamP |
| 1910 | ribulose-phosphate 3-epimerase | |||
| 2430 | DUF2556 family protein | |||
| 2435 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoMS1050ORF2435P |
| 2440 | DNA-binding transcriptional regulator Fis | |||
| 9510 | phosphohydrolase | |||
| 9515 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.EcoMS1050DcmP |
| 9520 | V | V.EcosPA11DcmP (100% identity) | V.EcoMS1050DcmP | |
| 9525 | drug/metabolite exporter YedA | |||
| 22620 | phage portal protein | |||
| 22625 | R | Eho218ORF15P (100% identity) | GTCGAC | EcoMS1050ORF22630P |
| 22630 | M | M.SflFF22ORF10P (100% identity) | GTCGAC | M.EcoMS1050ORF22630P |
| 22635 | replication endonuclease | |||
| plasmid pMS1050-2 | ||||
| 25135 | 73 aa hypothetical protein | |||
| 25140 | M | M.SspPIBORF23080P (100% identity) | M.EcoMS1050ORF25140P | |
| 25145 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19735 | endoribonuclease SymE | |||
| 19740 | R | EcoUTGmrSD2P (52% identity) | EcoMS1050GmrSDBP | |
| 19745 | R | EcoSW4848GmrSDAP (100% identity) | EcoMS1050GmrSDAP | |
| 19750 | Rpn family recombination-promoting | |||