Lacticaseibacillus paracasei subsp. tolerans FX-6-26 |
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Putative Lacticaseibacillus paracasei subsp. tolerans FX-6-26 RM systems
Ref: Yang,Z. et al. unpublished
REBASE ref # 35559
Complete sequence: 3,247,002 bp
GenBank #: CP109945
REBASE acronym: LpaFX626
Org_num: 62982
All begin OH135_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11195 | DUF262 domain-containing HNH endonuclease family | |||
| 11200 | S | S4.LpaFX6ORF11205P (100% identity) | S4.LpaFX626ORF11220P | |
| 11205 | site-specific integrase | |||
| 11210 | S | S3.LpaFX6ORF11205P (100% identity) | S3.LpaFX626ORF11220P | |
| ??? | S | S2.LpaFX6ORF11205P (100% identity) | S2.LpaFX626ORF11220P | |
| 11215 | S | S1.LpaFX6ORF11205P (100% identity) | S1.LpaFX626ORF11220P | |
| 11220 | M | M.LpaFX6ORF11205P (100% identity) | M.LpaFX626ORF11220P | |
| 11225 | R | LpaFX6ORF11205P (100% identity) | LpaFX626ORF11220P | |
| 11230 | 188 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5095 | endonuclease | |||
| 5100 | M | M.LpaFX6ORF5080P (100% identity) | M.LpaFX626ORF5100P | |
| 5105 | SAM-dependent methyltransferase | |||
| 5140 | 89 aa hypothetical protein | |||
| 5145 | M | M.LpaFX6ORF5125P (100% identity) | M.LpaFX626ORF5145P | |
| 5150 | YopX family protein | |||
| 7360 | RNA-binding transcriptional accessory protein | |||
| 7365 | M | M.LpaFX6ORF7345P (100% identity) | M.LpaFX626ORF7365P | |
| 7370 | 285 aa hypothetical protein | |||
| 8805 | Fic family protein | |||
| 8810 | RM | LpaFX6ORF8790P (100% identity) | LpaFX626ORF8810P | |
| 8815 | 60 aa hypothetical protein | |||
| 10600 | ISL3 family transposase | |||
| 10605 | R | LpaFX6ORF10595P (100% identity) | LpaFX626ORF10610P | |
| 10610 | M | M.LpaFX6ORF10595P (100% identity) | M.LpaFX626ORF10610P | |
| 10615 | 109 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11190 | 268 aa hypothetical protein | |||
| 11195 | R | LpaFX6GmrSDP (100% identity) | LpaFX626GmrSDP | |
| 11200 | restriction endonuclease subunit S | |||