Escherichia coli O2:K2:H1 |
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Putative Escherichia coli O2:K2:H1 RM systems
Ref: Meski,S. et al. unpublished
REBASE ref # 35540
Complete sequence: 4,918,902 bp
GenBank #: CP109921
REBASE acronym: Eco23704
Org_num: 62909
All begin N7L43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20155 | DUF262 domain-containing HNH endonuclease family | |||
| 20160 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | Eco23704ORF20165P |
| 20165 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.Eco23704ORF20165P |
| 20170 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.Eco23704ORF20165P |
| 20175 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1800 | cell division protein DamX | |||
| 1805 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco23704DamP |
| 1810 | ribulose-phosphate 3-epimerase | |||
| 2400 | DUF2556 family protein | |||
| 2405 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco23704ORF2405P |
| 2410 | DNA-binding transcriptional regulator Fis | |||
| 10240 | phosphohydrolase | |||
| 10245 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco23704DcmP |
| 10250 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.Eco23704DcmP |
| 10255 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20385 | ATP-binding domain-containing protein | |||
| 20390 | M | M.EcoUTI89I (100% identity) | CACAG | M.Eco23704ORF20390P |
| 20395 | R | EcoUTI89IP (100% identity) | CACAG | Eco23704ORF20390P |
| 20400 | integrase arm-type DNA-binding domain-containing | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20175 | endoribonuclease SymE | |||
| ??? | R | EcoUTI89GmrSDP (97% identity) | Eco23704GmrSDP | |
| 20190 | Rpn family recombination-promoting | |||