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Putative Klebsiella pneumoniae YZ-58 RM systems
Ref: Li,R. and Li,Y. unpublished
REBASE ref # 35554
Sequence length: | GenBank #: | |
Chromosome: | 5,294,027 bp | CP109772 |
plasmid pYZ-58-110k: | 110,437 bp | CP109773 |
plasmid pYZ-58-173k: | 173,418 bp | CP109774 |
REBASE acronym: KpnYZ58
Org_num: 62971
All begin M4Z05_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
plasmid pYZ-58-173k | ||||
27380 | M48 family metallopeptidase | |||
27385 | R | KpnR46ORF1980P (100% identity) | KpnYZ58ORF27415P | |
27390 | cold shock domain-containing protein | |||
27395 | YecA family protein | |||
27400 | S | S.Sma1761ORF1255P (39% identity) | S2.KpnYZ58ORF27415P | |
27405 | IS5 family transposase | |||
27410 | S | S.Sma1761ORF1255P (61% identity) | S1.KpnYZ58ORF27415P | |
27415 | M | M.Sma1761ORF1255P (100% identity) | M.KpnYZ58ORF27415P | |
27420 | IS1 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2220 | cell division protein DamX | |||
2225 | M | M.KspC31DamP (100% identity) | GATC | M.KpnYZ58DamP |
2230 | ribulose-phosphate 3-epimerase | |||
3870 | DEAD/DEAH box helicase | |||
3875 | RM | SflLIN17ORF3140P (100% identity) | KpnYZ58ORF3875P | |
3880 | transposase | |||
9590 | phosphohydrolase | |||
9595 | M | M.KpnP0018DcmP (100% identity) | CCWGG | M.KpnYZ58DcmP |
9600 | V | V.Ksp2N3ORFEP (75% identity) | CCWGG | V.KpnYZ58DcmP |
9605 | drug/metabolite exporter YedA | |||
15635 | helix-turn-helix domain-containing protein | |||
15640 | M | M.Kpn3381ORFEP (95% identity) | M.KpnYZ58ORF15640P | |
15645 | tyrosine-type recombinase/integrase | |||
plasmid pYZ-58-110k | ||||
26740 | 277 aa hypothetical protein | |||
26745 | M | M.KquYZ22ORF27515P (100% identity) | M.KpnYZ58ORF26745P | |
26750 | 75 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21010 | winged helix-turn-helix domain-containing | |||
21015 | R | KpnS1305ORF13390P (100% identity) | KpnYZ58ORF21015P | |
21020 | LuxR C-terminal-related transcriptional |