Escherichia coli EC20-C72-1 |
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Putative Escherichia coli EC20-C72-1 RM systems
Ref: Nakayama,T. et al. unpublished
REBASE ref # 35473
| Sequence length: | GenBank #: | |
| Chromosome: | 4,599,111 bp | AP026961 |
| plasmid pEC20-C72-1-1: | 254,266 bp | AP026962 |
REBASE acronym: EcoC721
Org_num: 62906
All begin EC2072C1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21400 | metal-dependent hydrolase | |||
| 21410 | R | EcoS1711ORFDP (100% identity) | EcoC721ORF21430P | |
| 21420 | S | S1.EcoS1711ORFDP (100% identity) | S.EcoC721ORF21430P | |
| 21430 | M | M.EcoS1711ORFDP (100% identity) | M.EcoC721ORF21430P | |
| 21440 | 88 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3330 | cell division protein DamX | |||
| 3340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC721DamP |
| 3350 | ribulose-phosphate 3-epimerase | |||
| 4530 | acrEF/envCD operon repressor | |||
| 4540 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC721ORF4540P |
| 4550 | DNA-binding protein Fis | |||
| 14960 | 252 aa hypothetical protein | |||
| 14970 | R | EcoYSP81ORFBP (100% identity) | RCSRC | EcoC721ORF14970P |
| 14980 | 81 aa hypothetical protein | |||
| 16450 | phosphohydrolase | |||
| 16460 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoC721DcmP |
| 16470 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoC721DcmP |
| 16480 | multidrug transporter | |||
| 28290 | replication endonuclease from | |||
| 28300 | M | M.EcoTO6ORF3189P (97% identity) | GATC | M.EcoC721ORF28300P |
| 28310 | 75 aa hypothetical protein | |||
| 37450 | mcrBC 5-methylcytosine restriction system | |||
| 37460 | R | EcosEC21ORF19520P (72% identity) | GGTCTC | EcoC721ORF37500AP |
| 37470 | repressor TnpA | |||
| 37480 | transposase | |||
| 37490 | R | Eco177ORF8400CP (100% identity) | GGTCTC | EcoC721ORF37500BP |
| 37500 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC721ORF37500P |
| 37510 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC721ORF37500P |
| 37520 | ATPase AAA | |||
| plasmid pEC20-C72-1-1 | ||||
| 44010 | nuclease | |||
| ??? | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoC721ORF44030P |
| 44040 | 55 aa hypothetical protein | |||
| 45310 | 108 aa hypothetical protein | |||
| 45320 | M | M.YpsF1ORFBP (100% identity) | M.EcoC721ORF45320P | |
| 45330 | 202 aa hypothetical protein | |||
| 45550 | DNA-binding protein | |||
| 45560 | M | M.YpsF1ORFDP (84% identity) | M.EcoC721ORF45560P | |
| 45570 | 85 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14800 | 86 aa hypothetical protein | |||
| ??? | R | EcoPSS13ORFAP (100% identity) | EcoC721ORFAP | |
| 14810 | 108 aa hypothetical protein | |||